tablecode {seqinr} | R Documentation |
This function plots a genetic code table as in textbooks, that is
following the order u > c > a > g
so that synonymous codons
are almost always in the same boxes.
tablecode(numcode = 1, urn.rna = c("u", "c", "a", "g"), dia = TRUE)
numcode |
The genetic code number as in translate |
urn.rna |
The letters to display codons, use c("t","c", "a","g") if you want the code in terms of DNA sequence |
dia |
to produce a yellow/blue plot for slides |
J.R. Lobry
To have an overview of the seqinR's functionnality, please consult this vignette:
Charif, D., Lobry, J.R. (2005) SeqinR: a contributed package to the R project for statistical
computing devoted to biological sequences retrieval and analysis. Springer Verlag, Biological and Medical Physics/Biomedical Series, in preparation.
tablecode()