base64decode | Convert R vectors to/from the Base64 format |
base64encode | Convert R vectors to/from the Base64 format |
bin2raw | Convert R vectors to/from the raw binary format |
colAUC | Columnwise Area Under ROC Curve (AUC) |
combs | All Combinations of k Elements from Vector v |
EndRule | Moving Window Analysis of a Vector |
LogitBoost | LogitBoost Classification Algorithm |
msc.baseline.subtract | Baseline Subtraction for Mass Spectra Data |
msc.biomarkers.fill | Fill Empty Spaces in Biomarker Matrix |
msc.biomarkers.read.csv | Read and Write biomarker matrix in CSV format |
msc.biomarkers.write.csv | Read and Write biomarker matrix in CSV format |
msc.classifier.run | Train and Test Chosen Classifier. |
msc.classifier.test | Test a Classifier through Cross-validation |
msc.copies.merge | Merge Multiple Copies of Mass Spectra Samples |
msc.features.remove | Remove Highly Correlated Features |
msc.features.scale | Scale Classification Data |
msc.features.select | Reduce Number of Features Prior to Classification |
msc.mass.adjust | Perform Normalization and Mass Drift Adjustment for Mass Spectra Data. |
msc.mass.cut | Remove Low Mass Portion of the Mass Spectra Data. |
msc.msfiles.read.csv | Read Protein Mass Spectra from CSV files |
msc.peaks.align | Align Peaks of Mass Spectra into a "Biomarker" Matrix |
msc.peaks.alignment | Align Peaks of Mass Spectra into a "Biomarker" Matrix |
msc.peaks.clust | Clusters Peaks of Mass Spectra |
msc.peaks.find | Find Peaks of Mass Spectra |
msc.peaks.read.csv | Read and Write Mass Spectra Peaks in CSV Format |
msc.peaks.write.csv | Read and Write Mass Spectra Peaks in CSV Format |
msc.preprocess.run | Preprocessing Pipeline of Protein Mass Spectra |
msc.project.read | Read and Manage a Batch of Protein Mass Spectra |
msc.project.run | Read and Preprocess Protein Mass Spectra |
msc.sample.correlation | Sample Correlation |
msc.sample.split | Split Data into Test and Train Set |
predict.LogitBoost | Prediction Based on LogitBoost Classification Algorithm |
raw2bin | Convert R vectors to/from the raw binary format |
read.ENVI | Read and write binary data in ENVI format |
runmad | Moving Window Analysis of a Vector |
runmax | Moving Window Analysis of a Vector |
runmean | Moving Window Analysis of a Vector |
runmin | Moving Window Analysis of a Vector |
runquantile | Moving Window Analysis of a Vector |
trapz | Trapezoid Rule Numerical Integration |
write.ENVI | Read and write binary data in ENVI format |