Treatment Effect eXplorer for Microbial Ecology eXperiments (using Sequence Counts)


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Documentation for package ‘texmexseq’ version 0.1

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texmexseq-package Treatment Effect eXplorer for Microbial Ecology eXperiments
dpoilog probability density function for the Poisson lognormal distribution
Experiment Create many samples at once
ExtractQuadData Create many samples at once
PlotFitPP make and fit samples of OTUs
PlotPair make and fit pairs or quads of samples
PlotQuad make and fit pairs or quads of samples
poilogMLE maximum likelihood estimation for the Poisson lognormal
ReadOtuTable Create many samples at once
rpoilog probability density function for the Poisson lognormal distribution
Sample make and fit samples of OTUs
SampleFit make and fit samples of OTUs
SamplePair make and fit pairs or quads of samples
SampleQuad make and fit pairs or quads of samples
texmexseq Treatment Effect eXplorer for Microbial Ecology eXperiments