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| ClueR-package | CLUster Evaluation R package |
| CLUE | CLUster Evaluation R package |
| clustEnrichment | Cluster enrichment test |
| clustOptimal | Generate optimal clustering |
| enrichmentTest | Fisher's exact test-based enrichment test |
| fuzzPlot | Visualize fuzzy clustering results |
| hES | Human embryonic stem cell phosphoproteomics data |
| Pathways.KEGG | KEGG pathway annotations |
| Pathways.reactome | Reactome pathway annotations |
| PhosphoSite.human | PhosphoSitePlus annotations for human |
| PhosphoSite.mouse | PhosphoSitePlus annotations for mouse |
| runClue | Run CLUster Evaluation |
| temporalSimu | Temporal data simulation |