Flexible Parametric Survival and Multi-State Models


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Documentation for package ‘flexsurv’ version 0.6

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flexsurv-package flexsurv: Flexible parametric survival and multi-state models
basis Natural cubic spline basis
bc Breast cancer survival data
bosms3 Bronchiolitis obliterans syndrome after lung transplants
bosms4 Bronchiolitis obliterans syndrome after lung transplants
dbasis Natural cubic spline basis
dfss Natural cubic spline basis
dgenf Generalized F distribution
dgenf.orig Generalized F distribution (original parameterisation)
dgengamma Generalized gamma distribution
dgengamma.orig Generalized gamma distribution (original parameterisation)
dgompertz The Gompertz distribution
dllogis The log-logistic distribution
dsurvspline Royston/Parmar spline survival distribution
flexsurv flexsurv: Flexible parametric survival and multi-state models
flexsurvreg Flexible parametric regression for time-to-event data
flexsurvspline Flexible survival regression using the Royston/Parmar spline model.
fss Natural cubic spline basis
GenF Generalized F distribution
GenF.orig Generalized F distribution (original parameterisation)
GenGamma Generalized gamma distribution
GenGamma.orig Generalized gamma distribution (original parameterisation)
Gompertz The Gompertz distribution
Hexp Hazard and cumulative hazard functions
hexp Hazard and cumulative hazard functions
Hgamma Hazard and cumulative hazard functions
hgamma Hazard and cumulative hazard functions
Hgenf Generalized F distribution
hgenf Generalized F distribution
Hgenf.orig Generalized F distribution (original parameterisation)
hgenf.orig Generalized F distribution (original parameterisation)
Hgengamma Generalized gamma distribution
hgengamma Generalized gamma distribution
Hgengamma.orig Generalized gamma distribution (original parameterisation)
hgengamma.orig Generalized gamma distribution (original parameterisation)
Hgompertz The Gompertz distribution
hgompertz The Gompertz distribution
Hllogis The log-logistic distribution
hllogis The log-logistic distribution
Hlnorm Hazard and cumulative hazard functions
hlnorm Hazard and cumulative hazard functions
Hsurvspline Royston/Parmar spline survival distribution
hsurvspline Royston/Parmar spline survival distribution
Hweibull Hazard and cumulative hazard functions
hweibull Hazard and cumulative hazard functions
lines.flexsurvreg Add fitted flexible survival curves to a plot
Llogis The log-logistic distribution
model.frame.flexsurvreg Extract original data from 'flexsurvreg' objects.
model.matrix.flexsurvreg Extract original data from 'flexsurvreg' objects.
msfit.flexsurvreg Cumulative intensity function for parametric multi-state models
normboot.flexsurvreg Simulate from the asymptotic normal distribution of parameter estimates.
pars.fmsm Transition-specific parameters in a flexible parametric multi-state model
pgenf Generalized F distribution
pgenf.orig Generalized F distribution (original parameterisation)
pgengamma Generalized gamma distribution
pgengamma.orig Generalized gamma distribution (original parameterisation)
pgompertz The Gompertz distribution
pllogis The log-logistic distribution
plot.flexsurvreg Plots of fitted flexible survival models
pmatrix.fs Transition probability matrix from a fully-parametric, time-inhomogeneous Markov multi-state model
pmatrix.simfs Transition probability matrix from a fully-parametric, semi-Markov multi-state model
psurvspline Royston/Parmar spline survival distribution
qgeneric Generic function to find quantiles of a distribution
qgenf Generalized F distribution
qgenf.orig Generalized F distribution (original parameterisation)
qgengamma Generalized gamma distribution
qgengamma.orig Generalized gamma distribution (original parameterisation)
qgompertz The Gompertz distribution
qllogis The log-logistic distribution
qsurvspline Royston/Parmar spline survival distribution
rgenf Generalized F distribution
rgenf.orig Generalized F distribution (original parameterisation)
rgengamma Generalized gamma distribution
rgengamma.orig Generalized gamma distribution (original parameterisation)
rgompertz The Gompertz distribution
rllogis The log-logistic distribution
rsurvspline Royston/Parmar spline survival distribution
sim.fmsm Simulate paths through a fully parametric semi-Markov multi-state model
summary.flexsurvreg Summaries of fitted flexible survival models
totlos.fs Total length of stay in particular states for a fully-parametric, time-inhomogeneous Markov multi-state model
totlos.simfs Expected total length of stay in specific states, from a fully-parametric, semi-Markov multi-state model
unroll.function Convert a function with matrix arguments to a function with vector arguments.