Significance Tests for Palaeoenvironmental Reconstructions


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Documentation for package ‘palaeoSig’ version 1.1-3

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palaeoSig-package Significance Tests of Quantitative Palaeoenvironmental Reconstructions
abundances Generates abundances
agelme Estimation of the relationship between Calibrated age and depth
anamorph Anamorph
arctic.env Arctic Pollen and associated environmental data
arctic.pollen Arctic Pollen and associated environmental data
centipede.plot Plots species optima and tolerances
cor.mat.fun Generates correlation matrix
coverage.plot Coverage of fossil taxa in modern calibration set
Hill.N2.core Calculate the effective number of species in the fossil data
identify.obscor Weighted correlation between weighted averaging optima and constrained ordination species scores.
jointsig Test if two variables jointly control changes in fossil data
make.env Generates environmental variables
make.set Function to simulate species data
mat.h MAT with minimum geographic distance for analogues
ModelMaker Proportion of variance in the fossil data explained by an environmental reconstruction
multi.mat MAT for multiple variables
obs.cor Weighted correlation between weighted averaging optima and constrained ordination species scores.
palaeoSig Significance Tests of Quantitative Palaeoenvironmental Reconstructions
plot.fittedAgelme Plots fitted agelme model and dates
plot.js Test if two variables jointly control changes in fossil data
plot.obscor Weighted correlation between weighted averaging optima and constrained ordination species scores.
plot.palaeoSig Proportion of variance in the fossil data explained by an environmental reconstruction
plot.RNE Random, neighbour, environment deletion analysis for transfer function model
predict.agelme Predicts the Calibrated age
randomTF Proportion of variance in the fossil data explained by an environmental reconstruction
randomTFmm Proportion of variance in the fossil data explained by an environmental reconstruction
rne Random, neighbour, environment deletion analysis for transfer function model
species Generates species response parameters for n dimensions
STOR Storsandsvatnet