chillR-package |
Statistical methods for phenology analysis in temperate fruit trees |
bloom_prediction |
Bloom prediction from chilling and forcing requirements, assumed to be fulfilled strictly in sequence |
california_stations |
Weather stations in California |
chile_agromet2chillR |
Convert a weather file downloaded from the Chilean Agromet website to chillR format |
chilling |
Calculation of chilling and heat from hourly temperature records |
Chilling_Hours |
Calculation of cumulative chill according to the Chilling Hours Model |
chilling_hourtable |
Add chilling and heat accumulation to table of hourly temperatures |
chillR |
Statistical methods for phenology analysis in temperate fruit trees |
color_bar_maker |
Make color scheme for bar plots in outputs of the chillR package |
daily_chill |
Calculation of daily chill and heat accumulation |
Dynamic_Model |
Calculation of cumulative chill according to the Dynamic Model |
fix_weather |
Weather data fixer and quality checker |
GDH |
Calculation of cumulative heat according to the Growing Degree Hours Model |
get_last_date |
Get the last date from a phenology record |
get_weather |
Download weather data from online database |
handle_chile_agromet |
List, download or convert to chillR format data from the Chilean Agromet database |
handle_cimis |
List, download or convert to chillR format data from the CIMIS database |
handle_gsod |
List, download or convert to chillR format data from the Global Summary of the Day database |
handle_ucipm |
List, download or convert to chillR format data from the UCIPM database |
handle_wunderground |
List, download or convert to chillR format data from the Weather Underground airport database |
interpolate_gaps |
Linear gap interpolation |
KA_bloom |
Cherry bloom data for Klein-Altendorf, Germany |
KA_weather |
Weather data for Klein-Altendorf, Germany |
leap_year |
Leap year finder |
make_all_day_table |
Fill in missing days in incomplete time series |
make_california_UCIPM_station_list |
Makes a list of the UC IPM weather stations |
make_chill_plot |
Plot climate metrics over time |
make_daily_chill_figures |
Produce image of daily chill and heat accumulation |
make_daily_chill_plot |
Plot daily climate metric accumulation throughout the year |
make_hourly_temps |
Make hourly temperature record from daily data |
make_multi_pheno_trend_plot |
Combine multiple phenology contour plots in one figure |
make_pheno_trend_plot |
Make image showing phenology response to temperatures during two phases |
plot_PLS |
Output of Partial Least Squares analysis results of phenology vs. daily mean temperatures |
PLS_chill_force |
Partial Least Squares analysis of phenology vs. accumulated daily chill and heat |
PLS_pheno |
Partial Least Squares analysis of phenology vs. daily mean temperatures |
runn_mean |
Running mean of a vector |
stack_hourly_temps |
Stacking of hourly temperatures |
step_model |
Calculation of cumulative temperature metric according to a user-defined stepwise weight function |
tempResponse |
Calculation of climatic metrics from hourly temperature records |
Utah_Model |
Calculation of cumulative chill according to the Utah Model |
VIP |
Calculate VIP scores for PLS regression |
weather2chillR |
Convert downloaded weather to chillR format |
YEARMODA2Date |
YEARMODA to Date conversion |