A Permutation Based Test for Biomarker Discovery in Microbiome Data

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Documentation for package ‘permubiome’ version 1.1

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get.data Parsing the data file.
normalize Normalize the microbiome dataset prior to perform the permutation test.
permubiome A Permutation Based Test for Biomarker Discovery in Microbiome Data
permutation Permutation-based non-parametric analysis to infer differential abundance of features between groups.
Permutation test for microbiome data A Permutation Based Test for Biomarker Discovery in Microbiome Data
plots Plotting the features with differential abundance.