Streamline Bioacoustic Analysis


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Documentation for package ‘warbleR’ version 1.1.2

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warbleR-package warbleR: A package to streamline bioacoustic analysis
autodetec Automatically detect vocalizations in sound files
checksels Check selection data frames
checkwavs Check .wav files
compare.methods Assessing the performance of acoustic distance measurements
coor.graph Coordinated singing graphs
coor.sing Selections of simulated interactive singing events
coor.test Randomization test for singing coordination
Cryp.soui Acoustic recording of _Crypturellus soui_ (Little Tinamou).
dfDTW Acoustic dissimilarity using dynamic time warping on dominant frequency contours
dfts Extract the dominant frequency values as a time series
ffDTW Acoustic dissimilarity using dynamic time warping on fundamental frequency contours
ffts Extract the fundamental frequency values as a time series
imp.raven Import Raven selections
imp.syrinx Import Syrinx selections
lspec Create long spectrograms of whole sound files
manualoc Interactive view of spectrograms
manualoc.df Data frame of manualoc() selections.
mp32wav Convert .mp3 files to .wav
Phae.long1 Acoustic recording #1 of _Phaethornis longirostris_
Phae.long2 Acoustic recording #2 of _Phaethornis longirostris_
Phae.long3 Acoustic recording #3 of _Phaethornis longirostris_
Phae.long4 Acoustic recording #1 of _Phaethornis longirostris_
querxc Access Xeno-Canto recordings and metadata
selection.files Selections files from Raven and Syrinx.
seltailor Interactive view of spectrograms to tailor start and end of selections
sig2noise Measure signal-to-noise ratio
sim.coor.sing Simulated coordinated singing events.
snrspecs Spectrograms with background noise margins
specan Measure acoustic parameters in batches of sound files
specreator Spectrograms of selected signals
trackfreqs Spectrograms with frequency measurements
warbleR warbleR: A package to streamline bioacoustic analysis
wavdur Measure the duration of sound files
xcmaps Maps of Xeno-Canto recordings by species
xcorr Spectrogram cross-correlation
xcorr.graph Pairwise plots of spectrogram cross-correlation scores