Bayesian Synthetic Likelihood


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Documentation for package ‘BSL’ version 3.0.0

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BSL-package Bayesian synthetic likelihood
BSL Bayesian synthetic likelihood
bsl Performing BSL, BSLasso and semiBSL
bsl-class S4 class "bsl".
bsl-method S4 class "bsl".
BSLModel S4 class "BSLMODEL"
BSLMODEL-class S4 class "BSLMODEL"
cell Cell biology example
cell_logPrior Cell biology example
cell_prior Cell biology example
cell_sim Cell biology example
cell_sum Cell biology example
combinePlotsBSL Plot the densities of multiple "bsl" class objects.
cor2cov Convert a correlation matrix to a covariance matrix
fn Functions to be used in bsl (for internal use)
fn-method S4 class "BSLMODEL"
gaussianRankCorr Gaussian rank correlation
gaussianSynLike Estimating the Gaussian synthetic likelihood
gaussianSynLikeGhuryeOlkin Estimating the Gaussian synthetic likelihood with an unbiased estimator
initialize.BSLMODEL S4 class "BSLMODEL"
ma2 An MA(2) model
ma2_logPrior An MA(2) model
ma2_prior An MA(2) model
ma2_sim An MA(2) model
ma2_sum An MA(2) model
marginalPostDefault Plot method for class "bsl"
marginalPostGgplot Plot method for class "bsl"
mgnk The multivariate G&K example
mgnk_sim The multivariate G&K example
mgnk_sum The multivariate G&K example
new.bsl S4 class "bsl".
penbsl S3 reference class of the result from tuning to select the optimal penalty for BSLasso
plot S4 class "bsl".
plot-method S4 class "bsl".
plot.bsl Plot method for class "bsl"
plot.penbsl S3 reference class of the result from tuning to select the optimal penalty for BSLasso
print.penbsl S3 reference class of the result from tuning to select the optimal penalty for BSLasso
selectPenalty Selecting BSLasso Penalty
semiparaKernelEstimate Estimating the semi-parametric joint likelihood
setns Find the length of summary statistics (for internal use)
setns-method S4 class "BSLMODEL"
show-method S4 class "bsl".
show.bsl Show method for class "bsl". Display the basic information of a bsl object.
summary S4 class "bsl".
summary-method S4 class "bsl".
summary.bsl Summary method for class "bsl"
validBSLModelObject S4 class "BSLMODEL"