filter_glmnet |
Filter: Elastic Net (glmnet) |
filter_ranger |
Filter: Random Forest (ranger) Variable Importance |
generate_subgrp_data |
Generate Subgroup Data-sets |
param_combine |
Overall Population Estimate: Aggregating Subgroup-Specific Parameter Estimates |
param_cox |
Parameter Estimation: Cox Regression |
param_dr |
Parameter Estimation: Double-robust estimator |
param_lm |
Parameter Estimation: Linear Regression |
param_ple |
Parameter Estimation: Patient-Level Estimates |
param_rmst |
Parameter Estimation: Restricted Mean Survival Time (RMST) |
ple_bart |
Patient-level Estimates: BART |
ple_causal_forest |
Patient-level Estimates: Causal Forest |
ple_glmnet |
Patient-level Estimates: Elastic Net (glmnet) |
ple_ranger |
Patient-level Estimates: Ranger |
ple_rfsrc |
Patient-level Estimates: randomForestSRC |
ple_train |
Patient-level Estimates: Train Model |
plot.PRISM |
plot.PRISM |
plot_dependence |
Partial dependence plots: Single Variable (marginal effect) or heat map (2 to 3 variables). |
plot_importance |
Importance Plot: Visualize relative importance of variables |
predict.ple_train |
Patient-level Estimates Model: Prediction |
predict.PRISM |
PRISM: Patient Response Identifier for Stratified Medicine (Predictions) |
predict.submod_train |
Subgroup Identification: Train Model (Predictions) |
PRISM |
PRISM: Patient Response Identifier for Stratified Medicine |
PRISM_resamp |
PRISM (Resample): Patient Response Identifier for Stratified Medicine |
PRISM_train |
PRISM (Train): Patient Response Identifier for Stratified Medicine |
submod_ctree |
Subgroup Identification: Conditional Inference Trees (ctree) |
submod_glmtree |
Subgroup Identification: Model-based partitioning (glmtree) |
submod_lmtree |
Subgroup Identification: Model-based partitioning (lmtree) |
submod_otr |
Subgroup Identification: Optimal Treatment Regime (through ctree) |
submod_rpart |
Subgroup Identification: CART (rpart) |
submod_train |
Subgroup Identification: Train Model |
submod_weibull |
Subgroup Identification: Model-based partitioning (Weibull) |
summary.PRISM |
PRISM: Patient Response Identifier for Stratified Medicine (Summary) |