A C D E F G I L M N P R S T misc
tiledb-package | tiledb - Interface to the TileDB Storage Manager API |
allows_dups | Returns logical value whether the array schema allows duplicate values or not. This is only valid for sparse arrays. |
allows_dups-method | Returns logical value whether the array schema allows duplicate values or not. This is only valid for sparse arrays. |
allows_dups<- | Sets toggle whether the array schema allows duplicate values or not. This is only valid for sparse arrays. |
allows_dups<--method | Sets toggle whether the array schema allows duplicate values or not. This is only valid for sparse arrays. |
as.data.frame.tiledb_config | Convert a 'tiledb_config' object to a R data.frame |
as.vector.tiledb_config | Convert a 'tiledb_config' object to a R vector |
as_data_frame | Construct a data.frame from query results |
attrs | Generic Methods |
attrs-method | Retrieve attributes from 'tiledb_array' object |
attrs-method | Returns a list of all 'tiledb_attr' objects associated with the 'tiledb_array_schema' |
attrs-method | Returns a 'tiledb_attr' object associated with the 'tiledb_array_schema' with a given name. |
attrs-method | Returns a 'tiledb_attr' object associated with the 'tiledb_array_schema' with a given index |
attrs-method | Retrieve attributes from 'tiledb_dense' object |
attrs-method | Retrieve attributes from 'tiledb_sparse' object |
attrs<- | Selects attributes for the given TileDB array |
attrs<--method | Selects attributes for the given TileDB array |
attrs<--method | Selects attributes for the given TileDB array |
attrs<--method | Selects attributes for the given TileDB array |
cell_order | Generic Methods |
cell_order-method | Returns the cell layout string associated with the 'tiledb_array_schema' |
cell_val_num | Generic Methods |
cell_val_num-method | Return the number of scalar values per attribute cell |
config | Generic Methods |
config-method | Retrieve the 'tiledb_config' object from the 'tiledb_ctx' |
datatype | Generic Methods |
datatype-method | Return the 'tiledb_attr' datatype |
datatype-method | Return the 'tiledb_dim' datatype |
datatype-method | Returns tiledb_domain TileDB type string |
dim.tiledb_array_schema | Retrieve the dimension (domain extent) of the domain |
dim.tiledb_dim | Retrieves the dimension of the tiledb_dim domain |
dim.tiledb_domain | Retrieve the dimension (domain extent) of the domain |
dimensions | Generic Methods |
dimensions-method | Returns a list of 'tiledb_dim' objects associated with the 'tiledb_array_schema' |
dimensions-method | Returns a list of the tiledb_domain dimension objects |
domain | Generic Methods |
domain-method | Returns the 'tiledb_domain' object associated with a given 'tiledb_array_schema' |
domain-method | Return the 'tiledb_dim' domain |
extended | Retrieve data.frame extended returns columns toggle |
extended-method | Retrieve data.frame extended returns columns toggle |
extended<- | Set data.frame extended return columns toggle |
extended<--method | Set data.frame extended return columns toggle |
filter_list | Generic Methods |
filter_list-method | Returns the offsets and coordinate filter_lists associated with the 'tiledb_array_schema' |
filter_list-method | Returns the 'tiledb_filter_list' object associated with the given 'tiledb_attr' |
fromDataFrame | Create a TileDB Dense Array from a given 'data.frame' Object |
generics | Generic Methods |
is.anonymous | Returns TRUE if the tiledb_dim is anonymous |
is.anonymous.tiledb_attr | Returns TRUE if the tiledb_dim is anonymous |
is.anonymous.tiledb_dim | Returns TRUE if the tiledb_dim is anonymous |
is.integral | Generic Methods |
is.integral-method | Returns TRUE is tiledb_domain is an integral (integer) domain |
is.sparse | Generic Methods |
is.sparse-method | Returns TRUE if the tiledb_array_schema is sparse, else FALSE |
is.sparse-method | Returns true is if the array or array_schema is sparse |
is.sparse-method | Check if object is sparse |
limitTileDBCores | Limit TileDB core use to a given number of cores |
max_chunk_size | Generic Methods |
max_chunk_size-method | Returns the filter_list's max_chunk_size |
name | Generic Methods |
name-method | Return the 'tiledb_attr' name |
name-method | Return the 'tiledb_dim' name |
nfilters | Generic Methods |
nfilters-method | Returns the filter_list's number of filters |
print.tiledb_metadata | Print a TileDB Array Metadata object |
return.data.frame | Retrieve data.frame return toggle |
return.data.frame-method | Retrieve data.frame return toggle |
return.data.frame-method | Retrieve data.frame return toggle |
return.data.frame-method | Retrieve data.frame return toggle |
return.data.frame<- | Set data.frame return toggle |
return.data.frame<--method | Set data.frame return toggle |
return.data.frame<--method | Set data.frame return toggle |
return.data.frame<--method | Set data.frame return toggle |
r_to_tiledb_type | Look up TileDB type corresponding to the type of an R object |
schema | Generic Methods |
schema-method | Return a schema from a tiledb_array object |
schema-method | Returns the 'tiledb_dense' array 'tiledb_schema' object |
schema-method | Return a schema from a sparse array |
selected_ranges | Retrieve selected_ranges values for the array |
selected_ranges-method | Retrieve selected_ranges values for the array |
selected_ranges<- | Set selected_ranges return values for the array |
selected_ranges<--method | Set selected_ranges return values for the array |
set_max_chunk_size | Generic Methods |
set_max_chunk_size-method | Set the filter_list's max_chunk_size |
show-method | Prints a tiledb_array object |
show-method | Prints an array schema object |
show-method | Prints an attribute object |
show-method | Prints the config object to STDOUT |
show-method | Prints a tiledb_dense array object |
show-method | Prints an domain object |
show-method | Prints a tiledb_sparse array object |
tile | Generic Methods |
tile-method | Return the 'tiledb_dim' tile extent |
tiledb_array | Constructs a tiledb_array object backed by a persisted tiledb array uri |
tiledb_array-class | An S4 class for a TileDB Array |
tiledb_array_close | Close a TileDB Array |
tiledb_array_create | Creates a new TileDB array given an input schema. |
tiledb_array_is_heterogeneous | Check for Heterogeneous Domain |
tiledb_array_is_homogeneous | Check for Homogeneous Domain |
tiledb_array_open | Open a TileDB Array |
tiledb_array_schema | Constructs a 'tiledb_array_schema' object |
tiledb_array_schema-class | An S4 class for the TileDB array schema |
tiledb_attr | Contructs a 'tiledb_attr' object |
tiledb_attr-class | An S4 class for a TileDB attribute |
tiledb_config | Creates a 'tiledb_config' object |
tiledb_config-class | An S4 class for a TileDB configuration |
tiledb_config_load | Load a saved 'tiledb_config' file from disk |
tiledb_config_save | Save a 'tiledb_config' object ot a local text file |
tiledb_ctx | Creates a 'tiledb_ctx' object |
tiledb_ctx-class | An S4 class for a TileDB context |
tiledb_ctx_set_default_tags | Sets default context tags |
tiledb_ctx_set_tag | Sets a string:string "tag" on the Ctx |
tiledb_delete_metadata | Delete a TileDB Array Metadata object given by key |
tiledb_dense | Constructs a tiledb_dense object backed by a persisted tiledb array uri |
tiledb_dense-class | An S4 class for a TileDB dense array |
tiledb_dim | Contructs a 'tiledb_dim' object |
tiledb_dim-class | An S4 class for a TileDB dimension object |
tiledb_domain | Constructs a 'tiledb_domain' object |
tiledb_domain-class | An S4 class for a TileDB domain |
tiledb_filter | Constructs a 'tiledb_filter' object |
tiledb_filter-class | An S4 class for a TileDB filter |
tiledb_filter_get_option | Returns the filter's option |
tiledb_filter_list | Constructs a 'tiledb_filter_list' object |
tiledb_filter_list-class | An S4 class for a TileDB filter list |
tiledb_filter_set_option | Set the filter's option |
tiledb_filter_type | Returns the type of the filter used |
tiledb_get_all_metadata | Return a TileDB Array Metadata object given by key |
tiledb_get_context | Retrieve a TileDB context object from the package cache |
tiledb_get_metadata | Return a TileDB Array Metadata object given by key |
tiledb_group_create | Creates a TileDB group object at given uri path |
tiledb_has_metadata | Test if TileDB Array has Metadata |
tiledb_is_supported_fs | Query if a TileDB backend is supported |
tiledb_ndim | Generic Methods |
tiledb_ndim-method | Return the number of dimensions associated with the 'tiledb_array_schema' |
tiledb_ndim-method | Returns the number of dimensions for a tiledb domain object |
tiledb_ndim-method | Returns the number of dimensions of the 'tiledb_domain' |
tiledb_num_metadata | Return count of TileDB Array Metadata objects |
tiledb_object_ls | List TileDB resources at a given root URI path |
tiledb_object_mv | Move a TileDB resource to new uri path |
tiledb_object_rm | Removes a TileDB resource |
tiledb_object_type | Return the TileDB object type string of a TileDB resource |
tiledb_object_walk | Recursively discover TileDB resources at a given root URI path |
tiledb_put_metadata | Store an object in TileDB Array Metadata under given key |
tiledb_query | Creates a 'tiledb_query' object |
tiledb_query-class | An S4 class for a TileDB Query object |
tiledb_query_add_range | Set a range for a given query |
tiledb_query_add_range_with_type | Set a range for a given query |
tiledb_query_alloc_buffer_ptr_char | Allocate a Query buffer for reading a character attribute |
tiledb_query_alloc_buffer_ptr_char_subarray | Allocate a Query buffer for reading a character attribute using a subarray |
tiledb_query_buffer_alloc_ptr | Allocate a Query buffer for a given type |
tiledb_query_create_buffer_ptr | Allocate and populate a Query buffer for a given object of a given data type. |
tiledb_query_create_buffer_ptr_char | Allocate and populate a Query buffer for writing the given char vector |
tiledb_query_finalize | Finalize TileDB Query |
tiledb_query_get_buffer_char | Retrieve content from a Query character buffer |
tiledb_query_get_buffer_ptr | Retrieve content from a Query buffer |
tiledb_query_get_layout | Get TileDB Query layout |
tiledb_query_result_buffer_elements | Get TileDB Query result buffer elements |
tiledb_query_set_buffer | Set TileDB Query buffer |
tiledb_query_set_buffer_ptr | Assigns to a Query buffer for a given attribute |
tiledb_query_set_buffer_ptr_char | Assign a buffer to a Query attribute |
tiledb_query_set_layout | Set TileDB Query layout |
tiledb_query_set_subarray | Set subarray for TileDB Query object |
tiledb_query_status | Get TileDB Query status |
tiledb_query_submit | Submit TileDB Query |
tiledb_query_type | Return TileDB Query type |
tiledb_schema_get_names | Get all Dimension and Attribute Names |
tiledb_schema_get_types | Get all Dimension and Attribute Types |
tiledb_set_context | Store a TileDB context object in the package cache |
tiledb_sparse | Constructs a tiledb_sparse object backed by a persisted tiledb array uri |
tiledb_sparse-class | An S4 class for a TileDB sparse array |
tiledb_stats_disable | Disable stats counters |
tiledb_stats_dump | Dump stats to file |
tiledb_stats_enable | Enable stats counters |
tiledb_subarray | Query a array using a subarray vector |
tiledb_version | The version of the libtiledb library |
tiledb_vfs | Creates a 'tiledb_vfs' object |
tiledb_vfs-class | An S4 class for a TileDB VFS object |
tiledb_vfs_create_bucket | Create a VFS Bucket |
tiledb_vfs_create_dir | Create a VFS Directory |
tiledb_vfs_empty_bucket | Empty a VFS Bucket |
tiledb_vfs_file_size | Return VFS File Size |
tiledb_vfs_is_bucket | Check for VFS Bucket |
tiledb_vfs_is_dir | Test for VFS Directory |
tiledb_vfs_is_empty_bucket | Check for empty VFS Bucket |
tiledb_vfs_is_file | Test for VFS File |
tiledb_vfs_move_dir | Move (or rename) a VFS Directory |
tiledb_vfs_move_file | Move (or rename) a VFS File |
tiledb_vfs_remove_bucket | Remove a VFS Bucket |
tiledb_vfs_remove_dir | Remove a VFS Directory |
tiledb_vfs_remove_file | Remove a VFS File |
tiledb_vfs_touch | Touch a VFS URI Resource |
tile_order | Generic Methods |
tile_order-method | Returns the tile layout string associated with the 'tiledb_array_schema' |
[,tiledb_array | Returns a TileDB array, allowing for specific subset ranges. |
[,tiledb_config | Gets a config parameter value |
[,tiledb_dense | Gets a dense array value |
[,tiledb_filter_list | Returns the filter at given index |
[,tiledb_sparse | Gets a sparse array value |
[-method | Returns a TileDB array, allowing for specific subset ranges. |
[-method | Gets a config parameter value |
[-method | Gets a dense array value |
[-method | Returns the filter at given index |
[-method | Gets a sparse array value |
[<-,tiledb_array | Sets a tiledb array value or value range |
[<-,tiledb_config | Sets a config parameter value |
[<-,tiledb_dense | Sets a dense array value |
[<-,tiledb_sparse | Sets a sparse array value |
[<--method | Sets a tiledb array value or value range |
[<--method | Sets a config parameter value |
[<--method | Sets a dense array value |
[<--method | Sets a sparse array value |