Modeling and Inferring Gene Networks


[Package List] [Top]

Documentation for package `GeneNet' version 1.0.1

User Guides and Package Vignettes

Read overview or browse directory.

Help Pages

cor.fit.mixture Fit Mixture Distribution to Estimated Correlation Coefficients
cor0.test Test of Vanishing (Partial) Correlation
dcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
ecoli Microarray Time Series Data for 102 E. Coli Genes Genes
ggm.estimate.pcor Graphical Gaussian Models: Small Sample Estimation of Partial Correlation
ggm.list.edges Graphical Gaussian Models: Testing Edges
ggm.make.graph Graphical Gaussian Models: Plotting the Network
ggm.plot.graph Graphical Gaussian Models: Plotting the Network
ggm.simulate.data Graphical Gaussian Models: Simulation of Data
ggm.simulate.pcor Graphical Gaussian Models: Simulation of Networks
ggm.test.edges Graphical Gaussian Models: Testing Edges
hotelling.transform Variance-Stabilizing Transformations of the Correlation Coefficient
ibeta Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
kappa2n Relationship Between Sample Size and the Degree of Freedom of Correlation Distribution
n2kappa Relationship Between Sample Size and the Degree of Freedom of Correlation Distribution
pcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
rcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
show.edge.weights Graphical Gaussian Models: Plotting the Network
z.transform Variance-Stabilizing Transformations of the Correlation Coefficient