plot.aplus {compositions} | R Documentation |
## S3 method for class 'aplus': plot(x,...,labels=colnames(X),cn=colnames(X),aspanel=FALSE,id=FALSE,idlabs=NULL,idcol=2,center=FALSE,scale=FALSE,pca=FALSE,col.pca=par("col"),add=FALSE,logscale=TRUE,col=par("col")) ## S3 method for class 'rplus': plot(x,...,labels=colnames(X),cn=colnames(X),aspanel=FALSE,id=FALSE,idlabs=NULL,idcol=2,center=FALSE,scale=FALSE,pca=FALSE,col.pca=par("col"),add=FALSE,logscale=FALSE,xlim=apply(X,2,function(x) c(0,max(x))),ylim=xlim,col=par("col")) ## S3 method for class 'rmult': plot(x,...,labels=colnames(X),cn=colnames(X),aspanel=FALSE,id=FALSE,idlabs=NULL,idcol=2,center=FALSE,scale=FALSE,pca=FALSE,col.pca=par("col"),add=FALSE,logscale=FALSE,col=par("col"))
x |
a dataset of an amount class |
... |
further graphical parameters passed (see
par ) |
add |
a logical indicating whether the information should just be added to an existing plot. In case of false a new plot is created. |
col |
The color to plot the data. |
labels |
The names of the parts |
cn |
The names of the parts to be used in a single panel. Internal use only. |
aspanel |
Logical indicating that only a single panel should be drawn and not the whole plot. Internal use only. |
id |
A logical. If true one can identify the points like with the
identify command. |
idlabs |
A character vector providing the labels to be used with
the identification, when id=TRUE |
idcol |
color of the idlabs-labels |
center |
a logical indicating whether a the data should be
centered prior to the plot. Centering is done in the choosen
philosophy. See scale |
scale |
a logical indicating whether a the data should be
scaled prior to the plot. Scaling is done in the choosen
philosophy. See scale |
pca |
A logical indicating whether the first principle component should be displayed in the plot. Currently direction of the principle component of the displayed subcomposition is displayed as a line. Later on a the principle componenent of the whole dataset should be displayed. |
col.pca |
The color to draw the principle component. |
logscale |
logical indication, whether logscale should be used |
xlim |
2xncol(x)-matrix giving the xlims for the columns of x |
ylim |
2xncol(x)-matrix giving the ylims for the columns of x |
TO DO: fix pca bug
K.Gerald v.d. Boogaart http://www.stat.boogaart.de
plot.aplus
,
qqnorm.acomp
,boxplot.acomp
data(SimulatedAmounts) plot(aplus(sa.lognormals)) plot(rplus(sa.lognormals)) plot(aplus(sa.lognormals5)) plot(rplus(sa.lognormals5))