gb2fasta {seqinr}R Documentation

conversion of GenBank file into fasta file

Description

Converts a single entry in GenBank format into a fasta file.

Usage

gb2fasta(source.file =
"ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Agrobacterium_tumefaciens_C58_Cereon/NC_003065.gbk",
destination.file = "Agrobacterium_tumefaciens_C58_Cereon.fasta")

Arguments

source.file GenBank file
destination.file Fasta file

Details

Multiple entries in GenBank file are not supported.

Value

none

Author(s)

J.R. Lobry

References

  citation("seqinr")

See Also

oriloc

Examples

## Not run: gb2fasta()

[Package seqinr version 1.0-6 Index]