Bayesian Graph Selection Based on Birth-Death MCMC Approach


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Documentation for package ‘BDgraph’ version 2.26

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BDgraph-package Bayesian Structure Learning in Graphical Models
BDgraph Bayesian Structure Learning in Graphical Models
bdgraph Search algorithm in graphical models
bdgraph.npn Nonparametric transfer
bdgraph.sim Synthetic graph data generator
compare Comparing the results
geneExpression Human gene expression dataset
gnorm Log of the normalizing constant of G-Wishart distribution
pgraph Posterior probabilities of the graphs
plinks Estimated posterior link probabilities
plot.bdgraph Plot function for 'S3' class '"bdgraph"'
plot.sim Plot function for 'S3' class '"sim"'
plotcoda Convergence plot
plotroc ROC plot
print.bdgraph Print function for 'S3' class '"bdgraph"'
print.sim Print function for 'S3' class '"sim"'
rgwish Sampling from G-Wishart distribution
rwish Sampling from Wishart distribution
select Graph selection
summary.bdgraph Summary function for 'S3' class '"bdgraph"'
surveyData Labor force survey data
traceplot Trace plot of graph size