Core package of FLR, fisheries modelling in R.

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Documentation for package `FLCore' version 1.4-3

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A B C D E F G H I L M N P Q R S T U V W X Y misc

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FLCore-package Core package of FLR, fisheries modelling in R.

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"aic<-"-methods Accesor and replacement methods for slots of complex objects
"catch.n<-"-methods Accesor and replacement methods for slots of complex objects
"catch.sel<-"-methods Accesor and replacement methods for slots of complex objects
"catch.wt<-"-methods Accesor and replacement methods for slots of complex objects
"catch<-"-methods Accesor and replacement methods for slots of complex objects
"catchability<-"-methods Accesor and replacement methods for slots of complex objects
"covar<-"-methods Accesor and replacement methods for slots of complex objects
"desc<-"-methods Accesor and replacement methods for slots of complex objects
"discards.n<-"-methods Accesor and replacement methods for slots of complex objects
"discards.sel<-"-methods Accesor and replacement methods for slots of complex objects
"discards.wt<-"-methods Accesor and replacement methods for slots of complex objects
"discards<-"-methods Accesor and replacement methods for slots of complex objects
"distribution<-"-methods Accesor and replacement methods for slots of complex objects
"effort<-"-methods Accesor and replacement methods for slots of complex objects
"fec<-"-methods Accesor and replacement methods for slots of complex objects
"gear<-"-methods Accesor and replacement methods for slots of complex objects
"harvest.spwn<-"-methods Accesor and replacement methods for slots of complex objects
"harvest<-"-methods Accesor and replacement methods for slots of complex objects
"index.var<-"-methods Accesor and replacement methods for slots of complex objects
"index<-"-methods Accesor and replacement methods for slots of complex objects
"landings.n<-"-methods Accesor and replacement methods for slots of complex objects
"landings.sel<-"-methods Accesor and replacement methods for slots of complex objects
"landings.wt<-"-methods Accesor and replacement methods for slots of complex objects
"landings<-"-methods Accesor and replacement methods for slots of complex objects
"m.spwn<-"-methods Accesor and replacement methods for slots of complex objects
"m<-"-methods Accesor and replacement methods for slots of complex objects
"mat<-"-methods Accesor and replacement methods for slots of complex objects
"mcmc<-"-methods Accesor and replacement methods for slots of complex objects
"model<-"-methods Accesor and replacement methods for slots of complex objects
"n<-"-methods Accesor and replacement methods for slots of complex objects
"name<-"-methods Accesor and replacement methods for slots of complex objects
"params<-"-methods Accesor and replacement methods for slots of complex objects
"price<-"-methods Accesor and replacement methods for slots of complex objects
"quant<-"-methods Quant, first dimension of FLQuant
"rec<-"-methods Accesor and replacement methods for slots of complex objects
"rechat<-"-methods Accesor and replacement methods for slots of complex objects
"residuals<-"-methods Accesor and replacement methods for slots of complex objects
"se<-"-methods Accesor and replacement methods for slots of complex objects
"spwn<-"-methods Accesor and replacement methods for slots of complex objects
"ssb<-"-methods Accesor and replacement methods for slots of complex objects
"stock.n<-"-methods Accesor and replacement methods for slots of complex objects
"stock.wt<-"-methods Accesor and replacement methods for slots of complex objects
"stock<-"-methods Accesor and replacement methods for slots of complex objects
"type<-"-methods Accesor and replacement methods for slots of complex objects
"units<-"-methods Extract and modify the units slot of an object
"var<-"-methods Class FLSR
"varacorr<-"-methods Accesor and replacement methods for slots of complex objects
"wt<-"-methods Accesor and replacement methods for slots of complex objects

-- A --

aic Accesor and replacement methods for slots of complex objects
aic,FLSR-method Class FLSR
aic-methods Accesor and replacement methods for slots of complex objects
aic<-,FLSR,numeric-method Class FLSR
apply,FLBiol,list,function-method Class FLBiol
apply,FLIndex,list,function-method Class FLIndex
apply,FLQuant,ANY,ANY-method FLQuant class and methods
apply,FLStock,vector,function-method Class FLStock for fish stock data and modelling output
areaMeans Common summary operations for FLQuants
areaSums Common summary operations for FLQuants
as.data.frame,FLQuant,ANY,ANY-method FLQuant class and methods
as.data.frame,FLQuants,ANY,missing-method Class "FLQuants"
as.data.frame,FLStock,ANY,ANY-method Class FLStock for fish stock data and modelling output
as.FLBiol Method for creating an FLBiol object from other classes
as.FLBiol,FLBiol-method Method for creating an FLBiol object from other classes
as.FLBiol-methods Method for creating an FLBiol object from other classes
as.FLFleet as.FLFleet method
as.FLFleet,FLStock-method as.FLFleet method
as.FLFleet-method as.FLFleet method
as.FLIndex Method for creating an FLIndex object from other classes
as.FLIndex,FLFleet-method Method for creating an FLIndex object from other classes
as.FLIndex-methods Method for creating an FLIndex object from other classes
as.FLQuant as.FLQuant
as.FLQuant,array-method as.FLQuant
as.FLQuant,data.frame-method as.FLQuant
as.FLQuant,FLQuant-method as.FLQuant
as.FLQuant,matrix-method as.FLQuant
as.FLQuant,vector-method as.FLQuant
as.FLQuant-methods as.FLQuant
as.FLSR Method for creating an FLSR object from other classes.
as.FLSR,FLBiol-method Class FLBiol
as.FLSR,FLSR-method Method for creating an FLSR object from other classes.
as.FLSR,FLStock-method Class FLStock for fish stock data and modelling output
as.FLStock FLStock
as.FLStock,FLFleet-method FLStock
as.FLStock,FLFleets-method Class FLFleets
as.FLStock,FLStock-method FLStock

-- B --

barchart,formula,FLQuant-method FLCore lattice methods
bevholt Stock-recruitment model function
bkey Lattice style bubble plots
bkey,list-method Lattice style bubble plots
bkey-methods Lattice style bubble plots
bt4 FLCore datasets
bubbles Lattice style bubble plots
bubbles,FLQuant-method Lattice style bubble plots
bubbles,FLQuants-method Lattice style bubble plots
bubbles,formula,FLQuant-method Lattice style bubble plots
bubbles,formula,FLQuants-method Class "FLQuants"
bubbles-methods Lattice style bubble plots
bwplot,formula,FLQuant-method FLCore lattice methods

-- C --

catch Accesor and replacement methods for slots of complex objects
catch,FLCatch-method Class FLCatch
catch,FLQuant-method FLQuant class and methods
catch,FLStock-method Class FLStock for fish stock data and modelling output
catch-methods Accesor and replacement methods for slots of complex objects
catch.n Accesor and replacement methods for slots of complex objects
catch.n,FLCatch-method Class FLCatch
catch.n,FLIndex-method Class FLIndex
catch.n,FLStock-method Class FLStock for fish stock data and modelling output
catch.n-methods Accesor and replacement methods for slots of complex objects
catch.n<-,FLCatch,FLQuant-method Class FLCatch
catch.n<-,FLIndex,FLQuant-method Class FLIndex
catch.n<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
catch.sel Accesor and replacement methods for slots of complex objects
catch.sel,FLCatch-method Class FLCatch
catch.sel-methods Accesor and replacement methods for slots of complex objects
catch.sel<-,FLCatch,FLQuant-method Class FLCatch
catch.wt Accesor and replacement methods for slots of complex objects
catch.wt,FLCatch-method Class FLCatch
catch.wt,FLIndex-method Class FLIndex
catch.wt,FLStock-method Class FLStock for fish stock data and modelling output
catch.wt-methods Accesor and replacement methods for slots of complex objects
catch.wt<-,FLCatch,FLQuant-method Class FLCatch
catch.wt<-,FLIndex,FLQuant-method Class FLIndex
catch.wt<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
catch<-,FLCatch,FLQuant-method Class FLCatch
catch<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
catch<-,FLStock,FLQuants-method Class FLStock for fish stock data and modelling output
catchability Accesor and replacement methods for slots of complex objects
catchability,FLCatch-method Class FLCatch
catchability-methods Accesor and replacement methods for slots of complex objects
catchability<-,FLCatch,FLQuant-method Class FLCatch
computeCatch Methods for estimating aggregated catch time series from dissagregated data
computeCatch,FLCatch-method Class FLCatch
computeCatch,FLIndex-method Methods for estimating aggregated catch time series from dissagregated data
computeCatch,FLStock-method Methods for estimating aggregated catch time series from dissagregated data
computeCatch-methods Methods for estimating aggregated catch time series from dissagregated data
computeDiscards Methods for estimating aggregated catch time series from dissagregated data
computeDiscards,FLCatch-method Class FLCatch
computeDiscards,FLStock-method Methods for estimating aggregated catch time series from dissagregated data
computeDiscards-methods Methods for estimating aggregated catch time series from dissagregated data
computeLandings Methods for estimating aggregated catch time series from dissagregated data
computeLandings,FLCatch-method Class FLCatch
computeLandings,FLStock-method Methods for estimating aggregated catch time series from dissagregated data
computeLandings-methods Methods for estimating aggregated catch time series from dissagregated data
covar Accesor and replacement methods for slots of complex objects
covar,FLSR-method Class FLSR
covar-methods Accesor and replacement methods for slots of complex objects
covar<-,FLSR,matrix-method Class FLSR
createFLAccesors Create accesor and replecement methods for slots of complex classes

-- D --

data.list Creates data.frame with list of values
data.list,FLQuants-method Creates data.frame with list of values
data.list,list-method Creates data.frame with list of values
data.list-methods Creates data.frame with list of values
desc Accesor and replacement methods for slots of complex objects
desc,FLBiol-method Class FLBiol
desc,FLFleet-method FLFleet class and methods
desc,FLIndex-method Class FLIndex
desc,FLSR-method Class FLSR
desc,FLStock-method Class FLStock for fish stock data and modelling output
desc-methods Accesor and replacement methods for slots of complex objects
desc<-,FLBiol,character-method Class FLBiol
desc<-,FLFleet,character-method FLFleet class and methods
desc<-,FLIndex,character-method Class FLIndex
desc<-,FLSR,character-method Class FLSR
desc<-,FLStock,character-method Class FLStock for fish stock data and modelling output
dimnames<-,FLQuant-method FLQuant class and methods
dims Provide information onn the dimensions and range of an object
dims,FLIndex-method Provide information onn the dimensions and range of an object
dims,FLQuant-method Provide information onn the dimensions and range of an object
dims-methods Provide information onn the dimensions and range of an object
dimSums Common summary operations for FLQuants
discards Accesor and replacement methods for slots of complex objects
discards,FLCatch-method Class FLCatch
discards,FLQuant-method FLQuant class and methods
discards,FLStock-method Class FLStock for fish stock data and modelling output
discards-methods Accesor and replacement methods for slots of complex objects
discards.n Accesor and replacement methods for slots of complex objects
discards.n,FLCatch-method Class FLCatch
discards.n,FLStock-method Class FLStock for fish stock data and modelling output
discards.n-methods Accesor and replacement methods for slots of complex objects
discards.n<-,FLCatch,FLQuant-method Class FLCatch
discards.n<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
discards.sel Accesor and replacement methods for slots of complex objects
discards.sel,FLCatch-method Class FLCatch
discards.sel-methods Accesor and replacement methods for slots of complex objects
discards.sel<-,FLCatch,FLQuant-method Class FLCatch
discards.wt Accesor and replacement methods for slots of complex objects
discards.wt,FLCatch-method Class FLCatch
discards.wt,FLStock-method Class FLStock for fish stock data and modelling output
discards.wt-methods Accesor and replacement methods for slots of complex objects
discards.wt<-,FLCatch,FLQuant-method Class FLCatch
discards.wt<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
discards<-,FLCatch,FLQuant-method Class FLCatch
discards<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
distribution Accesor and replacement methods for slots of complex objects
distribution,FLIndex-method Class FLIndex
distribution-methods Accesor and replacement methods for slots of complex objects
distribution<-,FLIndex,character-method Class FLIndex
dotplot,formula,FLQuant-method FLCore lattice methods

-- E --

effort Accesor and replacement methods for slots of complex objects
effort,FLFleet-method FLFleet class and methods
effort,FLIndex-method Class FLIndex
effort-methods Accesor and replacement methods for slots of complex objects
effort<-,FLFleet,FLQuant-method FLFleet class and methods
effort<-,FLIndex,FLQuant-method Class FLIndex

-- F --

fec Accesor and replacement methods for slots of complex objects
fec,FLBiol-method Class FLBiol
fec-methods Accesor and replacement methods for slots of complex objects
fec<-,FLBiol,FLQuant-method Class FLBiol
FLBiol Class FLBiol
FLBiol-class Class FLBiol
FLBiols Class FLBiols
FLBiols-class Class FLBiols
FLCatch Class FLCatch
FLCatch-class Class FLCatch
FLCore Core package of FLR, fisheries modelling in R.
FLCore-accesors Accesor and replacement methods for slots of complex objects
FLFleet FLFleet class and methods
FLFleet-class FLFleet class and methods
FLFleets Class FLFleets
FLFleets-class Class FLFleets
FLGenerics FLCore S4 Generic Functions
FLGenerics-methods FLCore S4 Generic Functions
FLIndex Class FLIndex
FLIndex-class Class FLIndex
FLIndexAcoustic Class FLIndex
FLIndexAcoustic-class Class FLIndex
FLIndexSurvey Class FLIndex
FLIndexSurvey-class Class FLIndex
FLIndices Class FLIndices
FLIndices-class Class FLIndices
FLQuant FLQuant
FLQuant,array-method FLQuant
FLQuant,FLQuant-method FLQuant
FLQuant,matrix-method FLQuant
FLQuant,missing-method FLQuant
FLQuant,vector-method FLQuant
FLQuant-class FLQuant class and methods
FLQuant-methods FLQuant
FLQuants Class "FLQuants"
FLQuants-class Class "FLQuants"
FLSR FLSR
FLSR-class Class FLSR
FLSR-methods FLSR
FLStock Class FLStock for fish stock data and modelling output
FLStock-class Class FLStock for fish stock data and modelling output
FLStocks Class FLStocks
FLStocks-class Class FLStocks

-- G --

gear Accesor and replacement methods for slots of complex objects
gear,FLCatch-method Class FLCatch
gear-methods Accesor and replacement methods for slots of complex objects
gear<-,FLCatch,character-method Class FLCatch

-- H --

harvest Accesor and replacement methods for slots of complex objects
harvest,FLStock-method Class FLStock for fish stock data and modelling output
harvest-methods Accesor and replacement methods for slots of complex objects
harvest.spwn Accesor and replacement methods for slots of complex objects
harvest.spwn,FLStock-method Class FLStock for fish stock data and modelling output
harvest.spwn-methods Accesor and replacement methods for slots of complex objects
harvest.spwn<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
harvest<-,FLStock,character-method Class FLStock for fish stock data and modelling output
harvest<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
histogram,formula,FLQuant-method FLCore lattice methods

-- I --

index Accesor and replacement methods for slots of complex objects
index,FLIndex-method Class FLIndex
index-methods Accesor and replacement methods for slots of complex objects
index.q Accesor and replacement methods for slots of complex objects
index.q,FLIndex-method Class FLIndex
index.q-methods Accesor and replacement methods for slots of complex objects
index.q<-,FLIndex,FLQuant-method Class FLIndex
index.var Accesor and replacement methods for slots of complex objects
index.var,FLIndex-method Class FLIndex
index.var-methods Accesor and replacement methods for slots of complex objects
index.var<-,FLIndex,FLQuant-method Class FLIndex
index<-,FLIndex,FLQuant-method Class FLIndex
is.FLBiol FLBiol
is.FLBiols Checks for objects of class FLBiols
is.FLFleet FLFleet
is.FLFleets FLFleets
is.FLIndex FLIndex
is.FLIndices FLIndices
is.FLQuant as.FLQuant
is.FLSR FLSR
is.FLStock FLStock
is.FLStocks FLStocks

-- L --

landings Accesor and replacement methods for slots of complex objects
landings,FLCatch-method Class FLCatch
landings,FLQuant-method FLQuant class and methods
landings,FLStock-method Class FLStock for fish stock data and modelling output
landings-methods Accesor and replacement methods for slots of complex objects
landings.n Accesor and replacement methods for slots of complex objects
landings.n,FLCatch-method Class FLCatch
landings.n,FLStock-method Class FLStock for fish stock data and modelling output
landings.n-methods Accesor and replacement methods for slots of complex objects
landings.n<-,FLCatch,FLQuant-method Class FLCatch
landings.n<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
landings.sel Accesor and replacement methods for slots of complex objects
landings.sel,FLCatch-method Class FLCatch
landings.sel-methods Accesor and replacement methods for slots of complex objects
landings.sel<-,FLCatch,FLQuant-method Class FLCatch
landings.wt Accesor and replacement methods for slots of complex objects
landings.wt,FLCatch-method Class FLCatch
landings.wt,FLStock-method Class FLStock for fish stock data and modelling output
landings.wt-methods Accesor and replacement methods for slots of complex objects
landings.wt<-,FLCatch,FLQuant-method Class FLCatch
landings.wt<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
landings<-,FLCatch,FLQuant-method Class FLCatch
landings<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
lapply,FLIndices,function-method Class FLIndices

-- M --

m Accesor and replacement methods for slots of complex objects
m,FLBiol-method Class FLBiol
m,FLStock-method Class FLStock for fish stock data and modelling output
m-methods Accesor and replacement methods for slots of complex objects
m.spwn Accesor and replacement methods for slots of complex objects
m.spwn,FLStock-method Class FLStock for fish stock data and modelling output
m.spwn-methods Accesor and replacement methods for slots of complex objects
m.spwn<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
m<-,FLBiol,FLQuant-method Class FLBiol
m<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
mat Accesor and replacement methods for slots of complex objects
mat,FLStock-method Class FLStock for fish stock data and modelling output
mat-methods Accesor and replacement methods for slots of complex objects
mat<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
mcf Make compatible "FLQuant" objects
mcf,FLQuants-method Make compatible "FLQuant" objects
mcf,list-method Make compatible "FLQuant" objects
mcf-methods Make compatible "FLQuant" objects
mcmc Accesor and replacement methods for slots of complex objects
mcmc,FLSR-method Class FLSR
mcmc-methods Accesor and replacement methods for slots of complex objects
mcmc<-,FLSR,list-method Class FLSR
model Accesor and replacement methods for slots of complex objects
model,FLSR-method Class FLSR
model-methods Accesor and replacement methods for slots of complex objects
model<-,FLSR,character-method Class FLSR

-- N --

n Accesor and replacement methods for slots of complex objects
n,FLBiol-method Class FLBiol
n-methods Accesor and replacement methods for slots of complex objects
n<-,FLBiol,FLQuant-method Class FLBiol
name Accesor and replacement methods for slots of complex objects
name,FLBiol-method Class FLBiol
name,FLCatch-method Class FLCatch
name,FLFleet-method FLFleet class and methods
name,FLIndex-method Class FLIndex
name,FLSR-method Class FLSR
name,FLStock-method Class FLStock for fish stock data and modelling output
name-methods Accesor and replacement methods for slots of complex objects
name<-,FLBiol,character-method Class FLBiol
name<-,FLCatch,character-method Class FLCatch
name<-,FLFleet,character-method FLFleet class and methods
name<-,FLIndex,character-method Class FLIndex
name<-,FLSR,character-method Class FLSR
name<-,FLStock,character-method Class FLStock for fish stock data and modelling output
names,FLQuant-method FLQuant class and methods
north.beam FLCore datasets

-- P --

params Accesor and replacement methods for slots of complex objects
params,FLSR-method Class FLSR
params-methods Accesor and replacement methods for slots of complex objects
params<-,FLSR,matrix-method Class FLSR
params<-,FLSR,vector-method Class FLSR
params<-,FLSR-method Class FLSR
ple4 FLCore datasets
ple4sex FLCore datasets
plot,FLBiol,missing-method Class FLBiol
plot,FLCatch,missing-method Class FLCatch
plot,FLFleet,missing-method FLFleet class and methods
plot,FLIndex,missing-method Class FLIndex
plot,FLIndices,missing-method Class FLIndices
plot,FLQuant,missing-method FLQuant class and methods
plot,FLSR,missing-method Class FLSR
plot,FLStock,missing-method Class FLStock for fish stock data and modelling output
predict,FLSR-method Class FLSR
price Accesor and replacement methods for slots of complex objects
price,FLCatch-method Class FLCatch
price-methods Accesor and replacement methods for slots of complex objects
price<-,FLCatch,FLQuant-method Class FLCatch

-- Q --

qapply Apply a Function over the FLQuant slots of an FLR S4 object
qapply,FLIndex,function-method Class FLIndex
qapply,FLSR,function-method Class FLSR
qapply,FLStock,function-method Class FLStock for fish stock data and modelling output
qhstk Stock-recruitment model function
quant Quant, first dimension of FLQuant
quant,FLQuant-method FLQuant class and methods
quant-methods Quant, first dimension of FLQuant
quant<-,FLQuant-method FLQuant class and methods
quantMeans Common summary operations for FLQuants
quantSums Common summary operations for FLQuants
quantTotals Common summary operations for FLQuants

-- R --

range,FLCatch-method Class FLCatch
range,FLStock-method Class FLStock for fish stock data and modelling output
range<-,FLCatch,numeric-method Class FLCatch
range<-,FLStock,numeric-method Class FLStock for fish stock data and modelling output
read.FLIndex Import FLIndices data from a file
read.FLIndices Import FLIndices data from a file
read.FLStock Import stock data from a file
read.VPAFile Import stock data from a file
rec Accesor and replacement methods for slots of complex objects
rec,FLSR-method Class FLSR
rec-methods Accesor and replacement methods for slots of complex objects
rec<-,FLSR,FLQuant-method Class FLSR
rechat Accesor and replacement methods for slots of complex objects
rechat,FLSR-method Class FLSR
rechat-methods Accesor and replacement methods for slots of complex objects
rechat<-,FLSR,FLQuant-method Class FLSR
residuals Accesor and replacement methods for slots of complex objects
residuals,FLSR-method Class FLSR
residuals-methods Accesor and replacement methods for slots of complex objects
residuals<-,FLSR,FLQuant-method Class FLSR
revenue Calculate the revenue of a fleet
revenue,FLFleet-method FLFleet class and methods
ricker Stock-recruitment model function

-- S --

se Accesor and replacement methods for slots of complex objects
se,FLSR-method Class FLSR
se-methods Accesor and replacement methods for slots of complex objects
se<-,FLSR,numeric-method Class FLSR
seasonMeans Common summary operations for FLQuants
seasonSums Common summary operations for FLQuants
segreg Stock-recruitment model function
sel.pattern Accesor and replacement methods for slots of complex objects
sel.pattern,FLIndex-method Class FLIndex
sel.pattern-methods Accesor and replacement methods for slots of complex objects
sel.pattern<-,FLIndex,FLQuant-method Class FLIndex
setPlusGroup setPlusgroup for FLStock
setunits,FLBiol-method Class FLBiol
show,FLBiols-method Class FLBiols
show,FLQuant-method FLQuant class and methods
show,FLQuants-method Class "FLQuants"
sop Calculates the sum of products correction
south.beam FLCore datasets
spwn Accesor and replacement methods for slots of complex objects
spwn,FLBiol-method Class FLBiol
spwn-methods Accesor and replacement methods for slots of complex objects
spwn<-,FLBiol,FLQuant-method Class FLBiol
sr Stock-recruitment model function
srlkhd Likelihood of the S-R parameters
ssb Method for calculating Spawning Stock Biomass
ssb,FLSR-method Class FLSR
ssb,FLStock-method Class FLStock for fish stock data and modelling output
ssb-methods Accesor and replacement methods for slots of complex objects
ssb<-,FLSR,FLQuant-method Class FLSR
ssbpurec Method for calculating Spawning Stock Biomass per unit recruit
ssbpurec,FLStock-method Class FLStock for fish stock data and modelling output
steepvirginbiom Change to steepness/virgin biomass parameterisation
stock Accesor and replacement methods for slots of complex objects
stock,FLStock-method Class FLStock for fish stock data and modelling output
stock-methods Accesor and replacement methods for slots of complex objects
stock.n Accesor and replacement methods for slots of complex objects
stock.n,FLStock-method Class FLStock for fish stock data and modelling output
stock.n-methods Accesor and replacement methods for slots of complex objects
stock.n<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
stock.wt Accesor and replacement methods for slots of complex objects
stock.wt,FLStock-method Class FLStock for fish stock data and modelling output
stock.wt-methods Accesor and replacement methods for slots of complex objects
stock.wt<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
stock<-,FLStock,FLQuant-method Class FLStock for fish stock data and modelling output
stripplot,formula,FLQuant-method FLCore lattice methods
summary,FLBiol-method Class FLBiol
summary,FLBiols-method Class FLBiols
summary,FLCatch-method Class FLCatch
summary,FLFleet-method FLFleet class and methods
summary,FLFleets-method Class FLFleets
summary,FLIndex-method Class FLIndex
summary,FLIndices-method Class FLIndices
summary,FLQuant-method FLQuant class and methods
summary,FLQuants-method Class "FLQuants"
summary,FLSR-method Class FLSR
summary,FLStock-method Class FLStock for fish stock data and modelling output
summary,FLStocks-method Class FLStocks

-- T --

tofrm Method for generating fromulas from FLQuant objects.
tofrm,FLQuant-method FLQuant class and methods
tofrm,FLQuants-method Class "FLQuants"
tofrm-methods Method for generating fromulas from FLQuant objects.
transform,FLBiol-method Class FLBiol
transform,FLCatch-method Class FLCatch
transform,FLFleet-method FLFleet class and methods
transform,FLIndex-method Class FLIndex
transform,FLStock-method Class FLStock for fish stock data and modelling output
trim Method for trimming FLQuant objects.
trim,FLIndex-method Class FLIndex
trim,FLIndices-method Class FLIndices
trim,FLQuant-method FLQuant class and methods
trim,FLStock-method Class FLStock for fish stock data and modelling output
trim-methods Method for trimming FLQuant objects.
type Accesor and replacement methods for slots of complex objects
type,FLIndex-method Class FLIndex
type-methods Accesor and replacement methods for slots of complex objects
type<-,FLIndex,character-method Class FLIndex

-- U --

unitMeans Common summary operations for FLQuants
units Extract and modify the units slot of an object
units,FLQuant-method Extract and modify the units slot of an object
units,FLStock,list-method Class FLStock for fish stock data and modelling output
units,FLStock-method Extract and modify the units slot of an object
units-methods Extract and modify the units slot of an object
units<-,FLQuant,character-method Extract and modify the units slot of an object
units<-,FLStock,list-method Extract and modify the units slot of an object
unitSums Common summary operations for FLQuants
update,FLStock-method Class FLStock for fish stock data and modelling output

-- V --

var,FLSR,missing,missing,missing-method Class FLSR
var<-,FLSR,numeric-method Class FLSR
varacorr Accesor and replacement methods for slots of complex objects
varacorr,FLSR-method Class FLSR
varacorr-methods Accesor and replacement methods for slots of complex objects
varacorr<-,FLSR,numeric-method Class FLSR

-- W --

window window for FLQuants based classes
window,FLBiol-method window for FLQuants based classes
window,FLCatch-method window for FLQuants based classes
window,FLFleet-method window for FLQuants based classes
window,FLIndex-method window for FLQuants based classes
window,FLIndices-method window for FLQuants based classes
window,FLQuant-method window for FLQuants based classes
window,FLStock-method window for FLQuants based classes
window-methods window for FLQuants based classes
write.FLStock Write FLStock data to a file
wt Accesor and replacement methods for slots of complex objects
wt,FLBiol-method Class FLBiol
wt-methods Accesor and replacement methods for slots of complex objects
wt<-,FLBiol,FLQuant-method Class FLBiol

-- X --

xyplot,formula,FLQuant-method FLCore lattice methods
xyplot,formula,FLQuants-method FLCore lattice methods

-- Y --

yearMeans Common summary operations for FLQuants
yearSums Common summary operations for FLQuants
yearTotals Common summary operations for FLQuants

-- misc --

[,FLIndices-method Class FLIndices
[,FLQuant-method FLQuant class and methods
[,FLQuants-method Class "FLQuants"
[,FLStock-method Class FLStock for fish stock data and modelling output
[<-,FLQuant-method FLQuant class and methods
[<-,FLStock-method Class FLStock for fish stock data and modelling output