MCMCglmm-package |
Multivariate Generalised Linear Mixed Models |
at.level |
Incidence Matrix of Levels within a Factor |
at.set |
Incidence Matrix of Combined Levels within a Factor |
BTdata |
Blue Tit Data for a Quantitative Genetic Experiment |
BTped |
Blue Tit Pedigree |
commutation |
Commutation Matrix |
Ddivergence |
d-divergence |
Dexpressions |
List of unevaluated expressions for (mixed) partial derivatives of
fitness with respect to linear predictors. |
Dtensor |
Tensor of (mixed) partial derivatives |
evalDtensor |
Evaluates a list of (mixed) partial derivatives |
inverseA |
Inverse Relatedness Matrix and Phylogenetic Covariance Matrix |
knorm |
(Mixed) Central Moments of a Multivariate Normal Distribution |
KPPM |
Kronecker Product Permutation Matrix |
krzanowski.test |
Krzanowski's Comparison of Subspaces |
kunif |
Central Moments of a Uniform Distribution |
leg |
Evaluates Orthogonal Legendre Polynomials |
list2bdiag |
Forms the direct sum from a list of matrices |
MCMCglmm |
Multivariate Generalised Linear Mixed Models |
PlodiaPO |
Phenoloxidase measures on caterpillars of the Indian meal moth. |
PlodiaR |
Resistance of Indian meal moth caterpillars to the granulosis virus
PiGV. |
PlodiaRB |
Resistance (as a binary trait) of Indian meal moth caterpillars to the
granulosis virus PiGV. |
plotprior |
Histogram of draws from the prior distribution for the variance structure of an MCMCglmm model |
plotsubspace |
Plots covariance matrices |
posterior.cor |
Transforms posterior distribution of covariances into correlations |
posterior.evals |
Posterior distribution of eigenvalues |
posterior.mode |
Estimates the marginal parameter modes using kernel density estimation |
prunePed |
Pedigree pruning |
Ptensor |
Tensor of Sample (Mixed) Central Moments |
rbv |
Random Generation of MVN Breeding Values and Phylogenetic Effects |
rIW |
Random Generation from the Conditional Inverse Wishart Distribution |
rtnorm |
Random Generation from a Truncated Normal Distribution |
sm2asreml |
Converts sparseMatrix to asreml's giv format |
SShorns |
Horn type and genders of Soay Sheep |
Tri2M |
Lower/Upper Triangle Elements of a Matrix |