allele.recode |
Recode allele values to integer ranks |
banner |
Print a nice banner |
gcode |
Numeric Code for Genotypes |
geno.recode |
Recode Genotypes |
Ginv |
Compute Generalized Inverse of Input Matrix |
haplo.em |
EM Computation of Haplotype Probabilities |
haplo.enum |
Enumerate all possible pairs of haplotypes that are consistent with a set of un-phased multilocus markers |
haplo.hash |
Integer Rank Codes for Haplotypes |
haplo.score |
Score Statistics for Association of Traits with Haplotypes |
haplo.score.glm |
Compute haplotype score statistics for GLM |
haplo.score.podds |
Compute Haplotype Score Statistics for Ordinal Traits with Proportional Odds Model |
hla.demo |
HLA Gene Variantion and Serologic Response to Measles Vaccination |
locator.haplo |
Find Location from Mouse Clicks and Print Haplotypes on Plot |
plot.haplo.score |
Plot Haplotype Frequencies versus Haplotype Score Statistics |
print.haplo.score |
Print a haplo.score object |
ungcode |
Uncode Numeric Genotype Codes to Alleles |