fsnps {gap}R Documentation

A case-control data involving four SNPs with missing genotype

Description

This is a simulated data

Usage

data(hla)

Format

A data frame

id
subject id
y
a column of 0/1 indicating case/control
site1.a1
SNP 1 allele a1
site1.a2
SNP 1 allele a2
site2.a1
SNP 2 allele a1
site2.a2
SNP 2 allele a2
site3.a1
SNP 3 allele a1
site3.a2
SNP 3 allele a2
site4.a1
SNP 4 allele a1
site4.a2
SNP 4 allele a2

The last eight variables are genotypes for 4 SNPs, coded in characters

Source

Dr Sebastien Lissarrague of Genset


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