plotbackground {phyloarray}R Documentation

Plot background

Description

Make a plot of the background of a certain color and scan.

Usage

  plotbackground(datalist, dye="R", scan=1)

Arguments

datalist An object of type phyloarray
dye The dye of which the background should be plotted, i.e. "R" or "G".
scan The scan of which the background should be plotted. This may be a number (the number of the column) or a string (name of the column).

Value

Note

Author(s)

Kurt Sys (kurt.sys@advalvas.be)

References

See Also

Scandataraw Phylodata

calcbackground

filled.contour

Examples

  # load data this-is-escaped-codenormal-bracket29bracket-normal, i.e. this-is-escaped-codenormal-bracket30bracket-normal
  data(Phylodata)

  # plot background for red, temperature=58°C
  plotbackground(scans, dye="R", scan="58")

  # this is the same
  plotbackground(scans, scan="58")

  # and this too
  plotbackground(scans, scan=3)

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