caliblist {mscalib}R Documentation

Constructor

Description

Returns object of class caliblist.

Usage

caliblist(class,experiment,data,...)

Arguments

...
class string with class name "calibrestat","calibintstat".
data a list with calibstat objects
experiment string with experiment name.

Details

Returns objects of class calibrelist and calibintlist. The name of the class have to be specified as the first argument in the constructor. Constructor is used by function getrecalib.massvectorlist & getintcalib.massvectorlist

Value

calibrelist If called with first (class) argument set to "calibrelist".
calibintlist If called with first (class) argument set to "calibintlist".

Author(s)

Witold Wolski wolski@molgen.mpg.de

See Also

getrecalib.massvectorlist, getintcalib.massvectorlist,

Examples

 #Example calibrelist class:
 data(mvl)
 mvl<-mvl[1:10]
 res <- getrecalib(mvl)
 print(res)
 summary(res)
 image(res,what="Coef.Intercept")
 image(res,what="Coef.Slope")
 plot(res)
 hist(res)
 dres<-as.data.frame(res)
 plot(dres$Coef.Intercept,dres$PQM,xlab="Coef.Intercept",ylab="PQM")
 #greate subset.
 res2<-subset(res,PQM>10)
 length(res2)
 plot(res2)
 test<-applyrecalib(mvl, res2)

[Package Contents]