sortdata {phyloarray} | R Documentation |
Sort data from high to low, based on the data of the first column in each data matrix.
sortdata(datalist, dye="R", method="subtrbg")
datalist |
An object of type phyloarray |
dye |
The dye used for sorting data, i.e. "R" or "G". |
method |
The method for sorting. Only one method is included yet,
i.e. "subtrbg" , in which the data is sorted by subtracting the
background from the signal. More methods will be included in the future. |
Kurt Sys (kurt.sys@advalvas.be)
# load data this-is-escaped-codenormal-bracket32bracket-normal, i.e. this-is-escaped-codenormal-bracket33bracket-normal data(Phylodata) # for calculation of histogram cutoffs for good/bad spots # scans <- histcutoffs(scans) # # if background calculation is necessary # scans <- calcbackgroud(scans) # the first 25 rows of sorted scans$R sortdata(scans)$R[1:25, ] # and their ID's sortdata(scans)$ID[1:25] # sort scans on green scans <- sortdata(scans, dye="G") # check probes2probenames