A B C D E F G H I L M N O P Q R S T U W Y Z
CHNOSZ-package | Chemical Thermodynamics and Activity Diagrams |
add.obigt | Functions to Work with the Thermodynamic Database |
add.protein | Functions to Work with the Thermodynamic Database |
affinity | Chemical Affinities of Formation Reactions |
allparents | Extract Data from NCBI Taxonomy Files |
aminoacids | Functions to Work with Sequence Data |
anim | Functions to Make Animations |
anim.carboxylase | Functions to Make Animations |
anim.plasma | Functions to Make Animations |
anim.TCA | Functions to Make Animations |
apc | Mass Transfer Calculations |
axis.label | Functions to Create and Modify Plots |
basis | Basis Species |
basis.comp | Functions for Miscellaneous Tasks |
browse.refs | Functions to Work with the Thermodynamic Database |
buffer | Calculating Buffered Chemical Activities |
buffers | Thermodynamic Database and System Definition |
c2s | Functions to Manipulate Character Objects |
caller.name | Functions for Miscellaneous Tasks |
can.be.numeric | Functions to Manipulate Character Objects |
cgl | Equations of State |
change | Functions to Work with the Thermodynamic Database |
check.obigt | Functions to Work with the Thermodynamic Database |
checkEOS | Functions to Work with the Thermodynamic Database |
checkGHS | Functions to Work with the Thermodynamic Database |
convert | Functions to Convert Units |
cvrmsd | Functions for Various Statistical Operations |
def2gi | Functions to Work with BLAST Output Files |
describe | Functions for Miscellaneous Tasks |
diagram | Calculate and Plot Equilibrium Chemical Activities of Species |
dimSums | Functions to Work with Multidimensional Arrays |
dPdTtr | Functions for Miscellaneous Tasks |
draw.transfer | Mass Transfer Calculations |
element | Functions to Work with Chemical Formulas |
energy | Chemical Affinities of Formation Reactions |
energy.args | Chemical Affinities of Formation Reactions |
envert | Functions to Convert Units |
eos.args | Functions for Processing Argument Lists |
EOScalc | Regress equations-of-state parameters for aqueous species |
EOScoeffs | Regress equations-of-state parameters for aqueous species |
EOSlab | Regress equations-of-state parameters for aqueous species |
EOSplot | Regress equations-of-state parameters for aqueous species |
EOSregress | Regress equations-of-state parameters for aqueous species |
EOSvar | Regress equations-of-state parameters for aqueous species |
eqdata | Read data from an EQ6 output file |
equil.boltz | Calculate Logarithms of Activity of Species |
equil.react | Calculate Logarithms of Activity of Species |
examples | Run examples from the documentation |
expand.formula | Functions to Work with Chemical Formulas |
extdata | Extra Data |
extremes | Diversity Calculations for Chemical Species |
feldspar | Mass Transfer Calculations |
findit | Multidimensionally Optimize Chemical Activities |
get.expr | Protein Expression Data |
get.protein | Proteins from Model Organisms |
getnames | Extract Data from NCBI Taxonomy Files |
getnodes | Extract Data from NCBI Taxonomy Files |
getrank | Extract Data from NCBI Taxonomy Files |
GHS | Functions to Work with Chemical Formulas |
grep.file | Functions for Accessing FASTA Files |
groups | Thermodynamic Database and System Definition |
hkf | Equations of State |
id.blast | Functions to Work with BLAST Output Files |
info | Search the Thermodynamic Database |
ionize | Ionization Properties of Proteins |
is.fasta | Functions for Accessing FASTA Files |
label.plot | Functions to Create and Modify Plots |
list2array | Functions to Work with Multidimensional Arrays |
lograt | Functions for Various Statistical Operations |
longex | Run examples from the documentation |
lsub | Functions to Work with Lists |
lsum | Functions to Work with Lists |
makeup | Chemical Formulas and Compositions |
mod.buffer | Calculating Buffered Chemical Activities |
mod.obigt | Functions to Work with the Thermodynamic Database |
MP90.cp | Functions for Miscellaneous Tasks |
mtitle | Functions to Create and Modify Plots |
mylapply | Functions to Work with Lists |
nonideal | Functions for Miscellaneous Tasks |
nucleicacids | Functions to Work with Sequence Data |
nuts | Functions to Convert Units |
OBIGT | Thermodynamic Database and System Definition |
obigt2eos | Functions to Work with the Thermodynamic Database |
opt | Thermodynamic Database and System Definition |
outvert | Functions to Convert Units |
parent | Extract Data from NCBI Taxonomy Files |
plot.findit | Multidimensionally Optimize Chemical Activities |
pprod | Functions to Work with Lists |
protein | Properties of Proteins |
protein.formula | Functions to Work with Chemical Formulas |
protein.info | Properties of Proteins |
protein.length | Functions for Miscellaneous Tasks |
protein.residue | Properties of Proteins |
psum | Functions to Work with Lists |
qqr | Functions for Various Statistical Operations |
read.blast | Functions to Work with BLAST Output Files |
read.fasta | Functions for Accessing FASTA Files |
read.supcrt | Properties of Species and Reactions |
refs | Thermodynamic Database and System Definition |
residualsplot | Functions to Create and Modify Plots |
residue.formula | Functions to Work with Chemical Formulas |
residue.info | Properties of Proteins |
revisit | Diversity Calculations for Chemical Species |
richness | Diversity Calculations for Chemical Species |
rmsd | Functions for Various Statistical Operations |
s2c | Functions to Manipulate Character Objects |
sciname | Extract Data from NCBI Taxonomy Files |
slice | Functions to Work with Multidimensional Arrays |
slice.affinity | Functions to Work with Multidimensional Arrays |
spearman | Functions for Various Statistical Operations |
species | Species of Interest |
species.label | Functions to Create and Modify Plots |
splitline | Functions for Accessing FASTA Files |
state.args | Functions for Processing Argument Lists |
stress | Thermodynamic Database and System Definition |
strip | Calculate and Plot Equilibrium Chemical Activities of Species |
subcrt | Properties of Species and Reactions |
sum.refseq | Functions for Accessing FASTA Files |
taxonomy | Extract Data from NCBI Taxonomy Files |
thermo | Thermodynamic Database and System Definition |
thermo.axis | Functions to Create and Modify Plots |
thermo.plot.new | Functions to Create and Modify Plots |
thermo.postscript | Functions to Create and Modify Plots |
TP.args | Functions for Processing Argument Lists |
transfer | Mass Transfer Calculations |
trimfas | Functions for Accessing FASTA Files |
Ttr | Functions for Miscellaneous Tasks |
unitize | Functions for Miscellaneous Tasks |
util.args | Functions for Processing Argument Lists |
util.array | Functions to Work with Multidimensional Arrays |
util.blast | Functions to Work with BLAST Output Files |
util.character | Functions to Manipulate Character Objects |
util.data | Functions to Work with the Thermodynamic Database |
util.fasta | Functions for Accessing FASTA Files |
util.formula | Functions to Work with Chemical Formulas |
util.list | Functions to Work with Lists |
util.misc | Functions for Miscellaneous Tasks |
util.plot | Functions to Create and Modify Plots |
util.seq | Functions to Work with Sequence Data |
util.stat | Functions for Various Statistical Operations |
util.units | Functions to Convert Units |
water | Properties of Water |
water.AW90 | Properties of Water |
water.IAPWS95 | Properties of Water |
water.lines | Functions to Create and Modify Plots |
water.SUPCRT92 | Properties of Water |
water.WP02 | Properties of Water |
where.extreme | Diversity Calculations for Chemical Species |
which.balance | Functions for Miscellaneous Tasks |
which.pmax | Functions to Work with Lists |
write.blast | Functions to Work with BLAST Output Files |
write.supcrt | Properties of Species and Reactions |
yeastgfp | Proteins from Model Organisms |
ZC | Functions to Work with Chemical Formulas |