Analysis of Parent-Specific DNA Copy Numbers


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Documentation for package ‘PSCBS’ version 0.19.4

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PSCBS-package Package PSCBS
AbstractCBS The AbstractCBS class
callSegmentationOutliers Calls single-locus outliers along the genome
callSegmentationOutliers.default Calls single-locus outliers along the genome
CBS The CBS class
PairedPSCBS The PairedPSCBS class
PSCBS The PSCBS class
segmentByCBS Segment genomic signals using the CBS method
segmentByCBS.CBS Segment genomic signals using the CBS method
segmentByCBS.CNA Segment genomic signals using the CBS method
segmentByCBS.data.frame Segment genomic signals using the CBS method
segmentByCBS.default Segment genomic signals using the CBS method
segmentByPairedPSCBS Segment total copy numbers and allele B fractions using the Paired PSCBS method
segmentByPairedPSCBS.data.frame Segment total copy numbers and allele B fractions using the Paired PSCBS method
segmentByPairedPSCBS.default Segment total copy numbers and allele B fractions using the Paired PSCBS method
segmentByPairedPSCBS.PairedPSCBS Segment total copy numbers and allele B fractions using the Paired PSCBS method