CoreArray Genomic Data Structure (GDS) R Interface


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Documentation for package ‘gdsfmt’ version 0.9.5

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gdsfmt-package CoreArray Genomic Data Structure (GDS) R Interface
add.gdsn Add a GDS node
append.gdsn Append data to the specified variable
closefn.gds Close a GDS file
cnt.gdsn Return the number of child nodes
compression.gdsn Modify compression mode
createfn.gds Create a GDS file
delete.attr.gdsn Delete an attribute
delete.gdsn Delete a GDS node
gdsclass the class of GDS file
gdsfmt CoreArray Genomic Data Structure (GDS) R Interface
gdsn the class of a node of GDS file
get.attr.gdsn Get attributes
index.gdsn Return the specified node
lasterr.gds Return the last error
ls.gdsn Return the names of children nodes
name.gdsn Return the variable name of a node
objdesp.gdsn Return node description
openfn.gds Open a GDS file
print.gdsclass Show the information of class "gdsclass"
print.gdsn Show the information of class "gdsn"
put.attr.gdsn Put an attribute into a GDS file
read.gdsn Read data field of a GDS node
readmode.gdsn Return to read mode in the compression mode
rename.gdsn Rename a GDS node
setdim.gdsn Set the dimension of data field
sync.gds Synchronize a GDS file
write.gdsn Write data to a GDS node