OneHandClapping-package | Prediction of condition-specific transcription factor interactions |
biogridList.71 | TF interactions from BioGRID |
colorsbreaks | Generate color palette and breaks for heatmaps |
getFun | Class '"siscreen.IntScore"' |
getFun-method | Class '"siscreen.IntScore"' |
getInteractions | Class '"Screening"' |
getInteractions-method | Class '"Screening"' |
getParams | Class '"siscreen.IntScore"' |
getParams-method | Class '"siscreen.IntScore"' |
getValidated | Class '"Screening.validated"' |
getValidated-method | Class '"Screening.validated"' |
hclust-class | Class '"hclust"' |
OneHandClapping | Prediction of condition-specific transcription factor interactions |
plot-method | Class '"Screening"' |
salt.folds | mRNA folds after 30 min of 0.8M NaCl stimulation relative to wildtype |
Screening-class | Class '"Screening"' |
Screening.validated-class | Class '"Screening.validated"' |
siscreen | Perform OneHandClapping |
siscreen.IntScore-class | Class '"siscreen.IntScore"' |
siscreen.lr | Interaction Score for OneHandClapping |
siscreen.paircluster | Prediction Funtion for OneHandClapping |
siscreen.validate.biogrid | Validation using BioGRID for OnehandClapping |
yeastract | Yeastract database, TF-target relations |