PenLNM-package |
Group $l_1$ penalized logistic normal multinomial *LNM* regression model. |
Genera3 |
Taxa count data set of genera Bacteroids, Prevetella and Ruminococcus. |
Nutrients |
Data matrix of nutrients |
PenLN.CV |
Perform penalized LN model over a grid of penalty parameter values and returns the selected penalty based on cross-validation criterion. |
PenLNM |
Estimate the group l1 penalized LN/LNM model. |
PenLNM.CV |
Calculate the cross-validation of the penalized LNM approach for a pre-assigned penalty value. |
PenLNM.lmax |
Find the maximum penalty in the group l1 penalized LNM model |