SoilR-package | Models of Soil Organic Matter Decomposition |
as.character-method | TimeMap S4 class |
C14Atm | $^14C$ fraction in per mille |
C14Atm_NH | $^14C$ fraction in per mille |
correctnessOfModel | correctnessOfModel |
CourseExample_R14 | An example data set for parameter estimation |
creating Models | An overview about available shortcuts for model construction |
DataC | An example data set for parameter estimation |
DataI | An example data set for parameter estimation |
DataR14 | An example data set for parameter estimation |
DecompositionOperator | decomposition operator |
DecompositionOperator-class | decomposition operator |
deSolve.lsoda.wrapper | deSolve lsoda wrapper |
fT.Arrhenius | Effects of temperature on decomposition rates according the Arrhenius equation |
fT.Century1 | Effects of temperature on decomposition rates according the the CENTURY model |
fT.Century2 | Effects of temperature on decomposition rates according the the CENTURY model |
fT.Daycent1 | Effects of temperature on decomposition rates according to the DAYCENT model |
fT.Daycent2 | Effects of temperature on decomposition rates according to the DAYCENT model |
fT.Demeter | effects of temperature on decomposition rates according to the DEMETER model |
fT.KB | Effects of temperature on decomposition rates according to a model proposed by M. Kirschbaum (1995) |
fT.LandT | Effects of temperature on decomposition rates according to a function proposed by Lloyd and Taylor (1994) |
fT.linear | Effects of temperature on decomposition rates according to a linear model |
fT.Q10 | Effects of temperature on decomposition rates according to a Q10 function |
fT.RothC | Effects of temperature on decomposition rates according to the functions included in the RothC model |
fT.Standcarb | effects of temperature on decomposition rates according to the StandCarb model |
fW.Century | Effects of moisture on decomposition rates according to the CENTURY model |
fW.Daycent1 | Effects of moisture on decomposition rates according to the DAYCENT model |
fW.Daycent2 | #Effects of moisture on decomposition rates according to the DAYCENT model |
fW.Demeter | Effects of moisture on decomposition rates according to the DEMETER model |
fW.RothC | Effects of moisture on decomposition rates according to the RothC model |
fW.Standcarb | Effects of moisture on decomposition rates according to the StandCarb model |
GeneralModel | The most general costructor for class Model |
GeneralModel_14 | The most general costructor for class Model14 |
getAccumulatedRelease | access to the C content of the pools |
getAccumulatedRelease-method | Model |
getAccumulatedRelease14 | access to the C content of the pools |
getAccumulatedRelease14-method | Model_14 |
getC | access to the C content of the pools |
getC-method | Model |
getC14 | access to the C content of the pools |
getC14-method | Model_14 |
getFunctionDefinition | getFunctionDefinition |
getFunctionDefinition-method | TimeMap S4 class |
getMeanTransitTime | access to the mean transit time |
getMeanTransitTime-method | decomposition operator |
getReleaseFlux | access to the C content of the pools |
getReleaseFlux-method | Model |
getReleaseFlux14 | access to the C content of the pools |
getReleaseFlux14-method | Model_14 |
getSoilC14Fraction | access to the C content of the pools |
getSoilC14Fraction-method | Model_14 |
getTimeRange | getTimeRange |
getTimeRange-method | TimeMap S4 class |
getTimes | access to the time values the model solution is sougth for |
getTimes-method | Model |
getTotalC14CRatio | access to the C release flux from the pools |
getTotalC14CRatio-method | Model_14 |
getTotalReleaseFluxC14CRatio | access to the C release flux from the pools |
getTotalReleaseFluxC14CRatio-method | Model_14 |
getTransitTimeDistributionDensity | access to the transit time distribution |
getTransitTimeDistributionDensity-method | decomposition operator |
HarvardForest14CO2 | Soil 14CO2 efflux from Harvard Forest |
HIV_R | HIV R |
ICBMModel | Implementation of the Introductory Carbon Balance Model (ICBM) |
initialize-method | decomposition operator |
initialize-method | decomposition operator |
initialize-method | Model |
initialize-method | Model_14 |
initialize-method | TimeMap S4 class |
InputFlux | decomposition operator |
InputFlux-class | decomposition operator |
is.negative | is negative |
Model | Model |
Model-class | Model |
Models | An overview about available shortcuts for model construction |
Model_14 | Model_14 |
Model_14-class | Model_14 |
NpYdot | NpYdot |
OnepModel | Implementation of a one pool model |
OnepModel14 | Implementation of a one-pool C14 model |
ParallelModel | ParallelModel |
RespirationCoefficients | RespirationCoefficients |
RothCModel | Implementation of the RothCModel |
SoilR | Models of Soil Organic Matter Decomposition |
SoilR.euler | SoilR euler |
solver | solver |
ThreepFeedbackModel | Implementation of a three pool model with feedback structure |
ThreepFeedbackModel14 | Implementation of a three-pool C14 model with feedback structure |
ThreepParallelModel | Implementation of a three pool model with parallel structure |
ThreepParallelModel14 | Implementation of a three-pool C14 model with parallel structure |
ThreepSeriesModel | Implementation of a three pool model with series structure |
ThreepSeriesModel14 | Implementation of a three-pool C14 model with series structure |
TimeMap | TimeMap S4 class |
TimeMap-class | TimeMap S4 class |
TimeMap.from.Dataframe | TimeMap from Dataframe |
TimeMap.new | TimeMap new |
TwopFeedbackModel | Implementation of a two pool model with feedback structure |
TwopFeedbackModel14 | Implementation of a two-pool C14 model with feedback structure |
TwopParallelModel | Implementation of a two pool model with parallel structure |
TwopParallelModel14 | Implementation of a two-pool C14 model with parallel structure |
TwopSeriesModel | Implementation of a two pool model with series structure |
TwopSeriesModel14 | Implementation of a two-pool C14 model with series structure |