seqalign |
Computation details about a pairwise alignment |
seqcomp |
Compare two state sequences |
seqconc |
Concatenate vectors of states or events into a character string |
seqdecomp |
Convert a character string into a vector of states or events |
seqdef |
Create a state sequence object |
seqdiff |
Position-wise discrepancy analysis between groups of sequences |
seqdim |
Dimension of a set of sequences |
seqdist |
Distances (dissimilarities) between sequences |
seqdistmc |
Multichannel distances between sequences |
seqdplot |
Plot state sequence objects |
seqdss |
Extract distinct states sequence from a sequence object |
seqdur |
Extract state durations from a sequence object. |
seqeapplysub |
Checking for the presence of given event subsequences |
seqecmpgroup |
Identifying discriminating subsequences |
seqeconstraint |
Setting time constraints and the counting method |
seqecontain |
Check if sequence contains events |
seqecreate |
Create event sequence objects. |
seqefsub |
Searching for frequent subsequences |
seqeid |
Retrieve unique ids from an event sequence object. |
seqelength |
Lengths of event sequences |
seqelength<- |
Lengths of event sequences |
seqesetlength |
Lengths of event sequences |
seqetm |
Create a transition-definition matrix |
seqeweight |
Setting or retrieving weights of an event sequence object. |
seqeweight<- |
Setting or retrieving weights of an event sequence object. |
seqfind |
Indexes of state sequence(s) x in state sequence object y |
seqformat |
Conversion between sequence formats |
seqfplot |
Plot state sequence objects |
seqfpos |
Search for the first occurrence of a given element in a sequence |
seqgen |
Random sequences generation |
seqHtplot |
Plot state sequence objects |
seqici |
Complexity index of individual sequences |
seqient |
Within sequence entropies |
seqIplot |
Plot state sequence objects |
seqiplot |
Plot state sequence objects |
seqistatd |
State frequencies in each individual sequence |
seqlegend |
Plot a legend for the states in a sequence object |
seqlength |
Sequence length |
seqLLCP |
Compute the length of the longest common prefix of two sequences |
seqLLCS |
Compute the length of the longest common subsequence of two sequences |
seqlogp |
Logarithm of the probabilities of state sequences |
seqmeant |
Mean durations in each state |
seqmodst |
Sequence of modal states |
seqmpos |
Number of matching positions between two sequences. |
seqmsplot |
Plot state sequence objects |
seqmtplot |
Plot state sequence objects |
seqnum |
Transform into a sequence object with numerical alphabet. |
seqpcplot |
Parallel coordinate plot for sequence data |
seqplot |
Plot state sequence objects |
seqpm |
Find patterns in sequences |
seqrecode |
Recoding state sequence objects and factors |
seqrep |
Extracting sets of representative sequences |
seqrplot |
Extracting sets of representative sequences |
seqsep |
Adds separators to sequences stored as character string |
seqST |
Sequences turbulence |
seqstatd |
Sequence of transversal state distributions and their entropies |
seqstatf |
State frequencies in the whole sequence data set |
seqstatl |
List of distinct states or events (alphabet) in a sequence data set. |
seqsubm |
Create a substitution-cost matrix |
seqsubsn |
Number of distinct subsequences in a sequence. |
seqtab |
Frequency table of the sequences |
seqtransn |
Number of transitions in a sequence |
seqtrate |
Compute transition rates between states |
seqtree |
Tree structured analysis of a state sequence object. |
seqtree2dot |
Graphical representation of a dissimilarity tree |
seqtreedisplay |
Graphical rendering of a sequence regression tree |
stlab |
Get or set the state labels of a sequence object |
stlab<- |
Get or set the state labels of a sequence object |