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| ConnMatTools-package | Tools for working with connectivity matrices |
| betasVectorDefault | Compute vector of beta values |
| BevertonHolt | Beverton-Holt settler-recruit relationship |
| chile.loco | Connectivity matrix for loco (Concholepas concholepas) from Chile |
| ConnMatTools | Tools for working with connectivity matrices |
| DispersalPerRecruitModel | Population dynamics model based on lifetime-egg-production |
| DPRHomerangeGravity | Extended DPR population dynamics model to include homerange movement |
| eigs | Compute some eigenvalues of a matrix |
| hockeyStick | Hockey-stick settler-recruit relationship |
| laplacianConnMat | Uniform Laplacian connectivity matrix |
| localRetention | Local retention of a connectivity matrix |
| mergeSubpops | Merge subpopulations |
| optimalSplitConnMat | Iteratively, optimally split a connectivity matrix |
| protectedAreaSelection | Function to select optimal network of protected areas based on connectivity |
| qualitySubpops | Quality measure for subpopulation division |
| recSplitConnMat | Recursively subdivides a set of subpoplations |
| reducedConnMat | Reduced connectivity matrix according to a set of subpopulations |
| relativeLocalRetention | Relative local retention of a connectivity matrix |
| selfRecruitment | Self recruitment of a connectivity matrix |
| settlerRecruitSlopeCorrection | Correction for slope of settler-recruit relationship |
| splitConnMat | Split connectivity matrix into subpopulations |
| subpopsVectorToList | Convert subpopulation vector to a list of indices |