Evolutionary Rates Across Gradients

Documentation for package ‘EvoRAG’ version 1.0

EvoRAG-package	Evolutionary Rates Across Gradients
bird.pitch	example data sets of avian sister pairs with trait data and a gradient
bird.syllables	example data sets of avian sister pairs with trait data and a gradient
bootstrap.test	Estimate confidence intervals using bootstrap
EvoRAG	Evolutionary Rates Across Gradients
expectation.gradient	calculate the expected (i.e. mean) Euclidean distances for a gradient model
expectation.time	calculate the expected (i.e. mean) Euclidean distances through time given a rate of evolution, Beta.
find.mle.sister	internal EvoRAG functions
model.test.sisters	Fit evolutionary models for continuous trait data
MScorrection	Correct for finite sample size in Euclidean distances given known variances in each sample
MScorrection_MSwithin	internal EvoRAG functions
sim.sisters	simulate Euclidean distances for sister pair data under 10 evolutionary models
sisterContinuous	likelihood functions for continuous trait evolutionary models
sisterContinuous_logSpace	internal EvoRAG functions
starting.values	returns the null starting values used in model.test.sisters