Differential analysis of RNA-seq data with Poisson mixture models

Documentation for package ‘HTSDiff’ version 1.0.1

HTSDiff-package	Differential analysis of RNA-seq data with Poisson mixture models
HTSDiff	Differential analysis of RNA-seq data using a Poisson mixture model
initialDataset	RNA-seq data from Arabidopsis thaliana to be used to generate synthetic simulations
nullModelLogLike	Calculation of loglikelihood for null model in differential analysis.
syntheticData	Generate synthetic data with a pre-specified number or proportion of genes under the null hypothesis (non-differential expression)