CalMaTe - Improved allele-specific copy number of SNP arrays for downstream segmentation

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Documentation for package ‘calmate’ version 0.11.0

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calmate-package Package calmate
calmate Package calmate
calmateByThetaAB Normalize allele-specific copy numbers (CA,CB)
calmateByThetaAB.array Normalize allele-specific copy numbers (CA,CB)
calmateByTotalAndFracB Normalize allele-specific copy numbers (total,fracB)
calmateByTotalAndFracB.array Normalize allele-specific copy numbers (total,fracB)
CalMaTeCalibration The CalMaTeCalibration class