circlize-package | circos layout in R |
circlize | Return the coordinate in polar coordinate system in a specified cell |
circos.axis | Draw x-axis |
circos.clear | Reset the circos layout parameters and internal variables |
circos.initialize | Initialize the circos sectors |
circos.initializeWithIdeogram | Initialize the circos layout with an ideogram |
circos.lines | Add lines to the plotting region |
circos.link | Draw links between points or intervals |
circos.par | Parameters for circos layout |
circos.points | Add points to a plotting region |
circos.polygon | Draw polygon |
circos.rect | Draw rectangle-like grid |
circos.text | Draw text in a cell |
circos.trackHist | Draw histogram in cells among a whole track |
circos.trackLines | Add lines to the plotting regions in a same track |
circos.trackPlotRegion | Create plotting regions for a whole track |
circos.trackPoints | Add points to the plotting regions in a same track |
circos.trackText | Draw text in cells among the whole track |
circos.updatePlotRegion | Update the plotting region in an existed cell |
cytoband.col | Assign colors to cytogenetic band according to the Giemsa stain results |
draw.sector | Draw sectors or rings in a circle |
get.cell.meta.data | Get the meta data for a cell |
read.cytoband | Read cytoband data |
show.index | Label the sector index and the track index of each cell |