enaR-package |
Tools for ecological network analysis (ena) in R. |
as.extended |
Create an extended format matrix. |
bal |
Subfunction for balancing by either inputs or outputs. |
balance |
Balance flow network models. |
bcratio |
Calculates the ratio of positive to negative elements in a network. |
bgcModels |
Bigeochemical Cycling Models |
eigenCentrality |
Calculates the eigen centrality of a network. |
enaAll |
Conduct all major ENA. |
enaAscendency |
Calculates the ascendency of an ecological network. |
enaControl |
Control analyses of ecological networks. |
enaEnviron |
Ecological network environs. |
enaFlow |
Flow analyses of ecological networks. |
enaMTI |
Mixed Trophic Impacts (MTI) measures the impact of one species on another. |
enaR |
Tools for ecological network analysis (ena) in R. |
enaStorage |
Storage analyses of ecological networks. |
enaStructure |
Structure analyses of ecological network. |
enaUtility |
Utility analysis of ecological networks. |
environCentrality |
Calculates the environ centrality of the nodes in an ecological network. |
findPathLength |
Cumulative flow over a range of path lengths. |
force.balance |
Repeated, sequential application the balance function. |
get.ns |
Quick calculation of a range of network statistics. |
get.orient |
Get the current global matrix orientation setting. |
mExp |
Calculates the exponent of a matrix. |
oyster |
Intertidal oyster reef ecosystem model. |
pack |
Compile network information into a network class. |
read.enam |
Reads in ENA data from an excel file, formatted as Mdloti.xls |
read.nea |
Read NEA formatted network data files. |
read.scor |
Read SCOR formatted data files. |
read.wand |
Read WAND format files. |
scc |
Finds the strongly connected component (SCC) in a graph. |
scifix |
Standardizes scientific notation. |
set.orient |
Globally set the output matrix orientation. |
ssCheck |
Checks the balance of inputs and outputs from a network. |
structure.statistics |
Calculates the structural statistics (network statistics) of an ecological network. |
TES |
Calculate the total environ storage. |
TET |
Calculates the total environ throughflow for a ecosystem network model. |
troModels |
Trophic Models |
unpack |
"Unpacks" the components of a network object into separate objects. |
write.nea |
Write a network object to file using the NEA data format. |