getSequence {seqinr}R Documentation

Generic Function To Get a sequence

Description

Method for the classes of sequences: SeqFastadna, SeqFastaAA, SeqAcnucWeb and SeqFrag.

Usage

getSequence(object, as.string = FALSE)

Arguments

object an object of class SeqFastadna, SeqFastaAA, SeqAcnucWeb or SeqFrag.
as.string if TRUE sequences are returned as a string instead of a vector of chars.

Value

A vector of chars containing the sequence (default) or a string when as.string is set to TRUE.

Author(s)

D. Charif

References

citation("seqinr")

See Also

getFrag, c2s

Examples

 methods(getSequence)

[Package seqinr version 1.0-4 Index]