add.plot {GenABEL}R Documentation

function to plot additional GWAA results

Description

Add plot of results of GWA analysis

Usage

add.plot(x, ..., df = 1)

Arguments

x object of type scan.gwaa-class, as returned by scan.glm, qtscore, ccfast, emp.ccfast, emp.qtscore, or scan.haplo; or of type scan.gwaa.2D-class, as returned by scan.haplo.2D or scan.glm.2D.
... additional arguments to be passed to plot
df P-value at which df to add (1 or 2)

Value

No value returned.

Author(s)

Yurii Aulchenko

See Also

plot, snp.subset, scan.glm, qtscore, ccfast, emp.qtscore, emp.ccfast, scan.haplo, scan.haplo.2D, scan.glm.2D

Examples

data(srdta)
a <- ccfast("bt",srdta,snps=c(1:100))
plot(a)
a1 <- qtscore("bt~CRSNP",srdta,snps=c(1:100))
add.plot(a1,col="red",type="l")

[Package GenABEL version 1.1-8 Index]