geiger-package | GEIGER |
ape2ouch | Convert between ape and ouch formats |
area.between.curves | Area between two curves |
BDsim | Birth-death population simulator |
birthdeath.tree | Birth-death tree simulator |
crown.limits | Calculate net diversification rate with confindence limits, and test diversities |
crown.p | Calculate net diversification rate with confindence limits, and test diversities |
delta.tree | Tree transformations |
disp.calc | Calculate disparity |
dtt | Disparity-through-time |
fit.continuous | Model fitting for continuous data |
fit.discrete | Model fitting for discrete comparative data |
geiger | GEIGER |
geospiza | Data from Darwin's finches |
ic.sigma | Estimate Evolutionary VCV Matrix |
lambda.tree | Tree transformations |
likelihood.discrete | Likelihood for discrete character evolution |
linearchange.tree | Tree transformations |
name.check | Compares taxa in data and tree |
phy.anova | Phylogenetic ANOVA and MANOVA |
phy.manova | Phylogenetic ANOVA and MANOVA |
prune.extinct.taxa | Prune specified taxa from a phylogenetic tree |
prune.random.taxa | Prune specified taxa from a phylogenetic tree |
rate.estimate | Calculate net diversification rate with confindence limits, and test diversities |
rc | Relative cladogenesis test |
rescale.tree | Tree transformations |
sim.char | Simulate character evolution |
stem.limits | Calculate net diversification rate with confindence limits, and test diversities |
stem.p | Calculate net diversification rate with confindence limits, and test diversities |
tip.disparity | Tip disparity calculation |
tworate.tree | Tree transformations |