Compute biological inferences


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Documentation for package ‘bio.infer’ version 1.1-5

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bio.infer-package Scripts for computing biological inferences
bcnt.emapw Benthic count data for the western United States
bcnt.OR Benthic count data for western Oregon
bcnt.otu.OR Benthic count data with OTU
bcnt.tax.OR Benthic count with taxonomic hierarchy
bio.infer Scripts for computing biological inferences
coef.west.wt Weighted regression coefficients for western U.S.
envdata.emapw Environmental data from the western United States
envdata.OR Environmental data from western OR
formtomat Analyze formula string
get.otu Defines operational taxonomic units (OTUs)
get.taxonomic Merge benthic count data with the ITIS taxonomy table
infergui Graphical User Interface for biological inferences
itis.ttable ITIS taxonomic hierarchy table
load.revised.otu Loads a user-revised OTU table
load.revised.species Loads a user-revised list of species names
makess Make a site-OTU matrix
mlsolve Maximum likelihood inferences
modalDialog Modal dialog box using TclTK
ss.OR site-OTU matrix for western Oregon
taxon.env Estimate taxon-environment relationships
tklist.modal Modal select list dialog using TclTk
view.te View taxon-environment relationships