baselogit {HWEBayes} | R Documentation |
Calculates a set of k-1 baseline logits log(p_1/p_k), ..., log(p_{k-1}/p_k), from a set of probabilities p_1,...,p_k.
baselogit(probs)
probs |
A set of probabilities, p_1,...,p_k, where k is the number of alleles. |
This function is used by a number of other functions in the package, for example, to provide a parameterization for maximization and for importance sampling in the single f model.
baselogit |
Returns the set of k-1 baseline logits, where k is the number of alleles. |
Jon Wakefield (jonno@u.washington).
Wakefield, J. (2009). Bayesian methods for examining Hardy-Weinberg equilibrium. Biometrics.
invbaselogit
baselogit(probs=c(0.5,0.4,0.1))