scape-package {scape} | R Documentation |
Import and plot results from statistical catch-at-age models, used in fisheries stock assessments.
Import model results:
importCol | Coleraine model output |
plotCA | catch at age |
plotCL | catch at length |
plotIndex | abundance index |
plotLA | length at age |
plotB | biomass, recruitment, and landings |
plotN | numbers at age |
plotSel | selectivity and maturity |
x.cod , x.ling , x.oreo , x.sbw | cod, ling, oreo, and whiting assessments |
Tutorials can be found in the ‘scape/doc’ directory.
The functions Args
and ll
(package gdata) can be
useful for browsing unwieldy functions and objects.
Arni Magnusson arnima@u.washington.edu.
Magnusson, A. (2005) R goes fishing: Analyzing fisheries data using AD Model Builder and R. Proceedings of the 5th International Workshop on Distributed Statistical Computing. Available at http://students.washington.edu/arnima/s/pdf/dsc.pdf.
All scape graphics are trellis
plots, rendered with the
lattice package.
Once the best model(s) have been chosen, the scapeMCMC package can be used to diagnose MCMC runs.