AromaUnitTotalCnBinarySet {aroma.core} | R Documentation |
Package: aroma.core
Class AromaUnitTotalCnBinarySet
Object
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FullNameInterface
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GenericDataFileSet
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GenericTabularFileSet
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AromaTabularBinarySet
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AromaUnitSignalBinarySet
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CopyNumberDataSet
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AromaUnitTotalCnBinarySet
Directly known subclasses:
public static class AromaUnitTotalCnBinarySet
extends CopyNumberDataSet
An AromaUnitTotalCnBinarySet object represents a set of
AromaUnitTotalCnBinaryFile
s with identical chip types.
AromaUnitTotalCnBinarySet(...)
... |
Arguments passed to AromaUnitSignalBinarySet . |
Methods:
as.AromaUnitTotalCnBinarySetTuple | - | |
as.CopyNumberDataSetTuple | - | |
byName | - | |
exportTotalCnRatioSet | - | |
getAverageFile | - | |
getUnitNamesFile | - | |
nbrOfArrays | - |
Methods inherited from CopyNumberDataSet:
as, as.CopyNumberDataSet, hasAlleleBFractions, hasStrandiness
Methods inherited from AromaUnitSignalBinarySet:
byName, findByName, getAromaUgpFile, getChipType, getPlatform, validate
Methods inherited from GenericTabularFileSet:
calculateAverageColumnAcrossFiles, extractMatrix
Methods inherited from GenericDataFileSet:
append, appendFiles, appendFullNamesTranslator, appendFullNamesTranslatorByfunction, appendFullNamesTranslatorBylist, appendFullNamesTranslatorByNULL, as.list, byName, byPath, clearCache, clearFullNamesTranslator, copyTo, equals, extract, findByName, fromFiles, getAlias, getDefaultFullName, getFile, getFileClass, getFileSize, getFullNames, getNames, getPath, getPathnames, hasFile, indexOf, lapply, nbrOfFiles, sapply, seq, setAlias, setFullNamesTranslator, update2, updateFullName, updateFullNames, validate
Methods inherited from FullNameInterface:
appendFullNameTranslator, appendFullNameTranslatorBycharacter, appendFullNameTranslatorByfunction, appendFullNameTranslatorBylist, appendFullNameTranslatorByNULL, clearFullNameTranslator, clearListOfFullNameTranslators, getDefaultFullName, getFullName, getFullNameTranslator, getListOfFullNameTranslators, getName, getTags, hasTag, hasTags, setFullName, setFullNameTranslator, setListOfFullNameTranslators, setName, setTags, updateFullName
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)