extractRawCopyNumbers.CopyNumberChromosomalModel {aroma.core}R Documentation

Extracts relative copy numbers

Description

Extracts relative copy numbers for a particular array and chromosome.

Usage

## S3 method for class 'CopyNumberChromosomalModel':
extractRawCopyNumbers(this, array, chromosome, ..., logBase=2, cache=FALSE, force=FALSE, verbose=FALSE)

Arguments

array The index of the array to be extracted.
chromosome The index of the chromosome to be extracted.
... See subclasses.
logBase (optional) The base of the logarithm used for the ratios. If NULL, the ratios are not logged.
cache If TRUE, results are cached, otherwise not.
force If TRUE, cached results are ignored.
verbose See Verbose.

Value

See subclasses.

Author(s)

Henrik Bengtsson (http://www.braju.com/R/)

See Also

For more information see CopyNumberChromosomalModel.


[Package aroma.core version 1.4.0 Index]