AromaMicroarrayDataSet {aroma.core}R Documentation

The AromaMicroarrayDataSet class

Description

Package: aroma.core
Class AromaMicroarrayDataSet

Object
~~|
~~+--FullNameInterface
~~~~~~~|
~~~~~~~+--GenericDataFileSet
~~~~~~~~~~~~|
~~~~~~~~~~~~+--AromaMicroarrayDataSet

Directly known subclasses:

public abstract static class AromaMicroarrayDataSet
extends GenericDataFileSet

An AromaMicroarrayDataSet object represents a set of AromaMicroarrayDataFiles with identical chip types.

Usage

AromaMicroarrayDataSet(files=NULL, ...)

Arguments

files A list of AromaMicroarrayDataFile:s.
... Arguments passed to GenericDataFileSet.

Fields and Methods

Methods:
as.AromaMicroarrayDataSetList -
as.AromaMicroarrayDataSetTuple -
getAverageFile -
getChipType -
getPlatform -
nbrOfArrays -

Methods inherited from GenericDataFileSet:
append, appendFiles, appendFullNamesTranslator, appendFullNamesTranslatorByfunction, appendFullNamesTranslatorBylist, appendFullNamesTranslatorByNULL, as.list, byName, byPath, clearCache, clearFullNamesTranslator, copyTo, equals, extract, findByName, fromFiles, getAlias, getDefaultFullName, getFile, getFileClass, getFileSize, getFullNames, getNames, getPath, getPathnames, hasFile, indexOf, lapply, nbrOfFiles, sapply, seq, setAlias, setFullNamesTranslator, update2, updateFullName, updateFullNames, validate

Methods inherited from FullNameInterface:
appendFullNameTranslator, appendFullNameTranslatorBycharacter, appendFullNameTranslatorByfunction, appendFullNameTranslatorBylist, appendFullNameTranslatorByNULL, clearFullNameTranslator, clearListOfFullNameTranslators, getDefaultFullName, getFullName, getFullNameTranslator, getListOfFullNameTranslators, getName, getTags, hasTag, hasTags, setFullName, setFullNameTranslator, setListOfFullNameTranslators, setName, setTags, updateFullName

Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save

Author(s)

Henrik Bengtsson (http://www.braju.com/R/)


[Package aroma.core version 1.4.0 Index]