fit.CopyNumberSegmentationModel {aroma.core} | R Documentation |
Fits the model.
## S3 method for class 'CopyNumberSegmentationModel': fit(this, arrays=NULL, chromosomes=getChromosomes(this), force=FALSE, ..., .retResults=FALSE, verbose=FALSE)
arrays |
A vector of array indices specifying which arrays to
be considered. If NULL , all are processed. |
chromosome |
A vector of chromosomes indices specifying which
chromosomes to be considered. If NULL , all are processed. |
force |
If FALSE , the model will not be fitted again if it was
already fitted. |
... |
Additional arguments passed to the segmentation method for
the RawGenomicSignals . |
.retResults |
If TRUE , the segmentation fit structures are
returned for each fitted array and chromosome. |
verbose |
A logical or Verbose . |
Returns a named list
of named list
s.
Arguments in ...
are passed down to the internal fit function,
which means that it is possible to fine tune even further.
Henrik Bengtsson (http://www.braju.com/R/)
For more information see CopyNumberSegmentationModel
.