anninfo-class {iGenomicViewer}R Documentation

anninfo 'annotation information' class

Description

The anninfo object contains all information for a given annoation set. This includes but is not limited to names, chromosome locations, and genomic locations.

anninfo object structure

annotation
a data frame of information for the annotation set. The information included depends on the annotation file used and the user settings when creating the object with the makeAnnotation function. The data.frame must have Label and Chrom, as well as one of the options for genomic locations. see makeAnnotation for more details.
links
a data frame of web address information for the annotation set. It should have the same row dimension as the annotation data.frame.
images
a data frame of paths to images for the annotation set. It should have the same row dimensions as the annotation data.frame

Author(s)

Lori A. Shepherd

See Also

annotation


[Package iGenomicViewer version 2.4.6 Index]