updateOffset {mseq} | R Documentation |
Update the offsets for Poisson linear model, that is, the logarithms of gene expression levels when we take sequencing preferences into account. Only for internal use. Not available to users.
updateOffset(data, pred_count, log_expr)
data |
the data frame generated by expData.R |
pred_count |
the counts fitted by Poisson linear model |
log_expr |
The log expression levels (offsets) we had before this iteration. |
a numeric vector of the offsets