pdata-class {phylobase}R Documentation

Class "pdata"

Description

Data class for phylo4d objects

Objects from the Class

Objects can be created by calls of the form new("pdata", ...).

Slots

data:
A data frame of tip or node data. Can be accessed transparently with any of the data frame accessor methods
type:
A factor with length equal to ncol(data) and levels("multitype", "binary", "continuous", "DNA", "RNA", "aacid")
comment:
A character vector of length ncol(data)
metadata:
An arbitrary list, for storing other user-defined metadata

Methods

[
signature(x = "pdata"): access data rows, columns or elements
[<-
signature(x = "pdata"): set data rows, columns or elements
[[<-
signature(x = "pdata"): set data columns or elements
[[
signature(x = "pdata", i = "ANY", j = "ANY"): access data columns or elements
[[
signature(x = "pdata", i = "ANY", j = "missing"): set data columns or elements

Author(s)

Ben Bolker


[Package phylobase version 0.5 Index]