reps3 {qpcR}R Documentation

A qPCR dilution experiment with replicates (Stratagene MXPro3000P)

Description

A high quality dilution experiment with six 4-fold dilutions of the cDNA, and three replicates for each dilution.

Usage

data(reps3)

Format

A data frame with the PCR cycles and 21 qPCR runs with three replicates of six 4-fold dilutions. The replicates are defined by FX.Y (X = dilution number, Y = replicate number).

Details

The real-time PCR was conducted with primers for the S27a housekeeping gene in a MXPro3000P instrument (Stratagene). Data was ROX-normalized, but without smoothing.

Source

Heike Cappallo-Obermann, Bone Marrow Transplantation Unit, University Hospital Hamburg-Eppendorf.

Examples

## on single data
data(reps3)
m1 <- pcrfit(reps3, 1, 2, l5)
plot(m1)  

[Package qpcR version 1.2-4 Index]