landscape.mismatchdist {rmetasim} | R Documentation |
Calculate mismatch distribution from a landscape based upon the number of seqregating sites.
misdist <- landscape.mismatchdist(lnum=1,rland)
lnum |
locus number to calculate mismatch upon |
rland |
the Rmetasim landscape object |
Calculates a mismatch distribution for DNA-sequence-based loci.
A matrix with num loci columns and num populations rows. Each element reflects the estimated theta for that population x locus combination
exampleland <- landscape.new.example() exampleland <- landscape.simulate(exampleland, 4) misdist <- landscape.mismatchdist(3,exampleland) #will produce misdist #ridiculous output