Read and Manipulate GenAlEx-format Genotype Files


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Documentation for package ‘readGenalex’ version 0.4.1

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readGenalex-package Read and manipulate GenAlEx-format genotype files
computeGenalexColumns Determine numeric column positions occupied by named loci
dropGenalexLoci Remove specified loci from the 'readGenalex'-format 'data.frame'
example_genotypes Example genotypes for demonstrating readGenalex package functions
GenAlEx Read and manipulate GenAlEx-format genotype files
genotype Read and manipulate GenAlEx-format genotype files
getGenalexLocus Return genotype data for specified loci in the 'readGenalex'-format 'data.frame'
is.genalex Check to see if 'data.frame' was created by the 'readGenalex' package
printGenalexGenotype Print selected genotypes
putGenalexLocus Replace genotype data in a 'readGenalex'-format 'data.frame'
readGenalex Read GenAlEx-format genotypes file
reduceGenalexPloidy Reduce the ploidy of a 'readGenalex'-format 'data.frame'
reorderGenalexLoci Reorder a 'readGenalex'-format 'data.frame'