DataDir | Report the location of the Data Files |
FilterSmooth | Kalman filter and Rauch-Tung-Striebel smoother |
getFMfun | Calculate F/M given SPR and other parameters |
initialize-method | Create a new LB_lengths object |
initialize-method | Create a new LB_obj object |
initialize-method | Create a new LB_pars object |
LBSPRfit | Fit LBSPR model to length data |
LBSPRfit_ | Internal function to fit LBSPR model to length data |
LBSPRopt | Optimisation Routine for fitting LBSPR |
LBSPRsim | LBSPR Simulation Model |
LBSPRsim_ | Internal LBSPR Simulation Model |
LBSPR_NLLgtg | LBSPR Optimization function for GTG model |
LB_lengths-class | An S4 class containing length data |
LB_obj-class | An S4 class containing all parameters for the LBSPR model |
LB_pars-class | An S4 class containing life history and other parameters |
plotEsts | Plot LBSPR model estimates |
plotMat | Plot the maturity-at-length and selectivity-at-length curves |
plotSim | Plot simulated size composition |
plotSize | Plot the size data and model fits |
plotSPRCirc | Circle of estimated SPR and target and limit points |
plotTarg | Plot sampled length structure against target simulated size composition |